RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 DESP17661 470 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 TDO2P48775 406 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 RRS1Q15050 365 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 ERICH6BQ5W0A0 696 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 MKNK2Q9HBH9 465 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 LRRC7Q96NW7 1537 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 SLC5A1P13866 664 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 EPS15P42566 896 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 BRDTQ58F21 947 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 SUPT20HQ8NEM7 779 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 CUL5Q93034 780 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 CHD4Q14839 1912 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 H7C1D1 291 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 OFD1O75665 1012 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 RDXP35241 583 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 TXLNAP40222 546 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 MATR3P43243 847 aaKnown RBP eCLIP3.51□□□□□ -1.853e-7■■■■□ 22.9
SMCHD1-203ENST00000577880 ZNF444Q8N0Y2 327 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 PDCL3Q9H2J4 239 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 VEZTQ9HBM0 779 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 FGD6Q6ZV73 1430 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 SETBP1Q9Y6X0 1596 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 ARHGEF40Q8TER5 1519 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 ARHGAP23Q9P227 1491 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 NAIPQ13075 1403 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 LPXNO60711 386 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 SLC4A2P04920 1241 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 GPTP24298 496 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 HSPA1LP34931 641 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 NOP2P46087 812 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 FKBP4Q02790 459 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 TRAF1Q13077 416 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 FAM196AQ6ZSG2 479 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 DZIP1LQ8IYY4 767 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 NOD1Q9Y239 953 aa3.51□□□□□ -1.85
SMCHD1-203ENST00000577880 GNPATO15228 680 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 IDH1O75874 414 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 PTMSP20962 102 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 NFE2L2Q16236 605 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 TRIM22Q8IYM9 498 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 VSIG10Q8N0Z9 540 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 CNTROBQ8N137 903 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 LARGE2Q8N3Y3 721 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 GBP4Q96PP9 640 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 UBAC1Q9BSL1 405 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 IVNS1ABPQ9Y6Y0 642 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 NEBLO76041 1014 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC96Q2M329 555 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 TWISTNBQ3B726 338 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC152Q4G0S7 254 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 CABLES1Q8TDN4 633 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 ZNF526Q8TF50 670 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 PRKAG2Q9UGJ0 569 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 TBX22Q9Y458 520 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 PSMA5P28066 241 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 CCT4P50991 539 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 GSTO1P78417 241 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 TAF7Q15545 349 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 PPP4R3BQ5MIZ7 849 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 ANKRD18AQ8IVF6 992 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 TCP11L2Q8N4U5 519 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 USHBP1Q8N6Y0 703 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 BMP2KQ9NSY1 1161 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 DHX29Q7Z478 1369 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 ADCY10Q96PN6 1610 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 ZNF142P52746 1687 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 GNAI2P04899 355 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 MAP3K12Q12852 859 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 SYCP1Q15431 976 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 RBM17Q96I25 401 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 SIL1Q9H173 461 aa3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 ARIH1Q9Y4X5 557 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC141Q6ZP82 1450 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 MAGI2Q86UL8 1455 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ZMYM3Q14202 1370 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 NIM1KQ8IY84 436 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ZGPATQ8N5A5 531 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ZBTB3Q9H5J0 574 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 RGS17Q9UGC6 210 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 CTNNA3Q9UI47 895 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 NSFL1CQ9UNZ2 370 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 NIP7Q9Y221 180 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 RALGAPBQ86X10 1494 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC69A6NI79 296 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ZBTB24O43167 697 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ECM2O94769 699 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 SNRPA1P09661 255 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 KRT27Q7Z3Y8 459 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 STK11IPQ8N1F8 1099 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 PLCD3Q8N3E9 789 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 CNBD1Q8NA66 436 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 SEC63Q9UGP8 760 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ATP2B1P20020 1258 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ZNF804AQ7Z570 1209 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 SPRYD3Q8NCJ5 442 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ZHX3Q9H4I2 956 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 GPHNQ9NQX3 736 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ABT1Q9ULW3 272 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 TTC21AQ8NDW8 1320 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms