RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ABCA9Q8IUA7 1624 aa7.51□□□□□ -1.21
HMGB1P23-201ENST00000518743 ALKQ9UM73 1620 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 MMP16P51512 607 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 PTK7Q13308 1070 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 NCOA4Q13772 614 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 ZBTB33Q86T24 672 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 PLPP7Q8NBV4 271 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 SPSB2Q99619 263 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 ARHGAP9Q9BRR9 750 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 NOD1Q9Y239 953 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 LRRC7Q96NW7 1537 aa7.5□□□□□ -1.21
HMGB1P23-201ENST00000518743 DISP1Q96F81 1524 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 SSFA2P28290 1259 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 APLP1P51693 650 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 MEX3CQ5U5Q3 659 aaKnown RBP7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 ANKMY2Q8IV38 441 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 LARGE2Q8N3Y3 721 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 STK32AQ8WU08 396 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 SHANK2Q9UPX8 1470 aa7.49□□□□□ -1.21
HMGB1P23-201ENST00000518743 CARNS1A5YM72 827 aa7.48□□□□□ -1.21
HMGB1P23-201ENST00000518743 RXRBP28702 533 aa7.48□□□□□ -1.21
HMGB1P23-201ENST00000518743 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
HMGB1P23-201ENST00000518743 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
HMGB1P23-201ENST00000518743 CHIC2Q9UKJ5 165 aa7.48□□□□□ -1.21
HMGB1P23-201ENST00000518743 ZMYM4Q5VZL5 1548 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 FHOD3Q2V2M9 1422 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 C9orf84Q5VXU9 1444 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 CRTC2Q53ET0 693 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 ZNF772Q68DY9 489 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 DZIP3Q86Y13 1208 aaKnown RBP7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 DEPDC4Q8N2C3 294 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 PHTF2Q8N3S3 785 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 FAM174AQ8TBP5 190 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 BCL11AQ9H165 835 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 RAPGEF6Q8TEU7 1601 aa7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 RNF17Q9BXT8 1623 aaKnown RBP7.47□□□□□ -1.21
HMGB1P23-201ENST00000518743 OGFOD1Q8N543 542 aa7.46□□□□□ -1.22
HMGB1P23-201ENST00000518743 ADAM32Q8TC27 787 aa7.46□□□□□ -1.22
HMGB1P23-201ENST00000518743 DNAAF2Q9NVR5 837 aaKnown RBP7.46□□□□□ -1.22
HMGB1P23-201ENST00000518743 WBP1LQ9NX94 342 aa7.46□□□□□ -1.22
HMGB1P23-201ENST00000518743 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.22
HMGB1P23-201ENST00000518743 HECW1Q76N89 1606 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 ATP10AO60312 1499 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 PLA2R1Q13018 1463 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 MAGI2Q86UL8 1455 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 ATP2B4P23634 1241 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 CFAP74Q9C0B2 1584 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 BIVM-ERCC5R4GMW8 1640 aa7.45□□□□□ -1.22
HMGB1P23-201ENST00000518743 NBPF20Q3BBV1 942 aa7.44□□□□□ -1.22
HMGB1P23-201ENST00000518743 SIX5Q8N196 739 aa7.44□□□□□ -1.22
HMGB1P23-201ENST00000518743 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 RBM47A0AV96 593 aaKnown RBP7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 ADH1BP00325 375 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 SEC13P55735 322 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 DPYDQ12882 1025 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 USP4Q13107 963 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 TRAF7Q6Q0C0 670 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 SH3BP5LQ7L8J4 393 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 SEPT12Q8IYM1 358 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 UNC93B1Q9H1C4 597 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 EGFL7Q9UHF1 273 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 RAPGEF2Q9Y4G8 1499 aa7.43□□□□□ -1.22
HMGB1P23-201ENST00000518743 LRP5O75197 1615 aa7.42□□□□□ -1.22
HMGB1P23-201ENST00000518743 POLR1AO95602 1720 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P23-201ENST00000518743 SOWAHDA6NJG2 315 aa7.42□□□□□ -1.22
HMGB1P23-201ENST00000518743 PHLDB3Q6NSJ2 640 aa7.42□□□□□ -1.22
HMGB1P23-201ENST00000518743 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P23-201ENST00000518743 MYO3AQ8NEV4 1616 aa7.41□□□□□ -1.22
HMGB1P23-201ENST00000518743 ZNF142P52746 1687 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P23-201ENST00000518743 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
HMGB1P23-201ENST00000518743 ZPR1O75312 459 aa7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 GTF2IP78347 998 aa7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 AGERQ15109 404 aa7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 CCDC24Q8N4L8 307 aa7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 OCSTAMPQ9BR26 566 aa7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 CEP170BQ9Y4F5 1589 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P23-201ENST00000518743 ABCA8O94911 1581 aa7.39□□□□□ -1.23
HMGB1P23-201ENST00000518743 CDK12Q9NYV4 1490 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P23-201ENST00000518743 ATAD2Q6PL18 1390 aa7.39□□□□□ -1.23
HMGB1P23-201ENST00000518743 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
HMGB1P23-201ENST00000518743 SH3RF1Q7Z6J0 888 aa7.39□□□□□ -1.23
HMGB1P23-201ENST00000518743 BIN2Q9UBW5 565 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P23-201ENST00000518743 NPATQ14207 1427 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 MAGEB6P1A0A0J9YX57 407 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 M0R2N6 131 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 COPS2P61201 443 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 CLDN10P78369 228 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 PSME1Q06323 249 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 OXLD1Q5BKU9 147 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 CCDC102BQ68D86 513 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 FAM9AQ8IZU1 332 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 ZNF428Q96B54 188 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 SLC6A16Q9GZN6 736 aa7.38□□□□□ -1.23
HMGB1P23-201ENST00000518743 VWDEQ8N2E2 1590 aa7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 MYCP01106 439 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms