RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
TMEM39A-212ENST00000497993 MMP16P51512 607 aa8.74□□□□□ -1.01
TMEM39A-212ENST00000497993 IRF5Q13568 498 aa8.74□□□□□ -1.01
TMEM39A-212ENST00000497993 RTL5Q5HYW3 569 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-212ENST00000497993 E9PCH4 1651 aa8.74□□□□□ -1.01
TMEM39A-212ENST00000497993 SYNMO15061 1565 aa8.73□□□□□ -1.01
TMEM39A-212ENST00000497993 MYO5BQ9ULV0 1848 aa8.73□□□□□ -1.01
TMEM39A-212ENST00000497993 MED14O60244 1454 aa8.73□□□□□ -1.01
TMEM39A-212ENST00000497993 IQSEC2Q5JU85 1478 aa8.73□□□□□ -1.01
TMEM39A-212ENST00000497993 KIF3BO15066 747 aa8.73□□□□□ -1.01
TMEM39A-212ENST00000497993 ZNF428Q96B54 188 aa8.73□□□□□ -1.01
TMEM39A-212ENST00000497993 NOS1P29475 1434 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 ANKRD50Q9ULJ7 1429 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 SLIT1O75093 1534 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 CFAP99D6REC4 459 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 DXOO77932 396 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 S1PR4O95977 384 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 JUNDP17535 347 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 RFC5P40937 340 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 CEBPAP49715 358 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 LTBP4Q8N2S1 1624 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 TNRQ92752 1358 aa8.72□□□□□ -1.01
TMEM39A-212ENST00000497993 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.01
TMEM39A-212ENST00000497993 ARHGAP23Q9P227 1491 aa8.71□□□□□ -1.01
TMEM39A-212ENST00000497993 UGGT1Q9NYU2 1555 aa8.71□□□□□ -1.02
TMEM39A-212ENST00000497993 A0A0G2JS52 829 aa8.71□□□□□ -1.02
TMEM39A-212ENST00000497993 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
TMEM39A-212ENST00000497993 HELBQ8NG08 1087 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-212ENST00000497993 ESF1Q9H501 851 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-212ENST00000497993 IQGAP1P46940 1657 aa8.71□□□□□ -1.02
TMEM39A-212ENST00000497993 FBXO31Q5XUX0 539 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-212ENST00000497993 GGT6Q6P531 493 aa8.7□□□□□ -1.02
TMEM39A-212ENST00000497993 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
TMEM39A-212ENST00000497993 KCNA1Q09470 495 aa8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 PUS7Q96PZ0 661 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 PRDM9Q9NQV7 894 aa8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 ZNF330Q9Y3S2 320 aaPredicted RBP8.69□□□□□ -1.02
TMEM39A-212ENST00000497993 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
TMEM39A-212ENST00000497993 PTPRNQ16849 979 aa8.68□□□□□ -1.02
TMEM39A-212ENST00000497993 WASHC2CQ9Y4E1 1318 aa8.68□□□□□ -1.02
TMEM39A-212ENST00000497993 HFM1A2PYH4 1435 aa8.68□□□□□ -1.02
TMEM39A-212ENST00000497993 ADGRB3O60242 1522 aa8.68□□□□□ -1.02
TMEM39A-212ENST00000497993 TMEM131LA2VDJ0 1609 aa8.67□□□□□ -1.02
TMEM39A-212ENST00000497993 HSPA2P54652 639 aa8.67□□□□□ -1.02
TMEM39A-212ENST00000497993 KANK1Q14678 1352 aa8.67□□□□□ -1.02
TMEM39A-212ENST00000497993 BANK1Q8NDB2 785 aa8.67□□□□□ -1.02
TMEM39A-212ENST00000497993 TSC1Q92574 1164 aa8.67□□□□□ -1.02
TMEM39A-212ENST00000497993 STRCP1A6NGW2 1772 aa8.66□□□□□ -1.02
TMEM39A-212ENST00000497993 NAIPQ13075 1403 aa8.66□□□□□ -1.02
TMEM39A-212ENST00000497993 AP1G2O75843 785 aa8.66□□□□□ -1.02
TMEM39A-212ENST00000497993 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
TMEM39A-212ENST00000497993 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
TMEM39A-212ENST00000497993 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
TMEM39A-212ENST00000497993 BRD1O95696 1058 aa8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 RRP7BPQ9NSQ0 103 aa8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 COG6Q9Y2V7 657 aa8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 FCF1Q9Y324 198 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 KIF1BO60333 1816 aa8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 XIRP1Q702N8 1843 aaKnown RBP8.65□□□□□ -1.02
TMEM39A-212ENST00000497993 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
TMEM39A-212ENST00000497993 CCNYL3P0C7X3 344 aa8.64□□□□□ -1.03
TMEM39A-212ENST00000497993 TRPM2O94759 1503 aa8.64□□□□□ -1.03
TMEM39A-212ENST00000497993 CPS1P31327 1500 aa8.64□□□□□ -1.03
TMEM39A-212ENST00000497993 SOCS7O14512 581 aa8.63□□□□□ -1.03
TMEM39A-212ENST00000497993 RGS20O76081 388 aa8.63□□□□□ -1.03
TMEM39A-212ENST00000497993 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
TMEM39A-212ENST00000497993 NWD1Q149M9 1564 aa8.63□□□□□ -1.03
TMEM39A-212ENST00000497993 CHD2O14647 1828 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-212ENST00000497993 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
TMEM39A-212ENST00000497993 PER1O15534 1290 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-212ENST00000497993 USP17L8P0C7I0 530 aa8.62□□□□□ -1.03
TMEM39A-212ENST00000497993 FAM50AQ14320 339 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-212ENST00000497993 CCDC24Q8N4L8 307 aa8.62□□□□□ -1.03
TMEM39A-212ENST00000497993 ZFYVE9O95405 1425 aa8.62□□□□□ -1.03
TMEM39A-212ENST00000497993 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
TMEM39A-212ENST00000497993 KCNH2Q12809 1159 aa8.61□□□□□ -1.03
TMEM39A-212ENST00000497993 CHIC2Q9UKJ5 165 aa8.61□□□□□ -1.03
TMEM39A-212ENST00000497993 USTQ9Y2C2 406 aa8.61□□□□□ -1.03
TMEM39A-212ENST00000497993 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 ZBTB24O43167 697 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 F12P00748 615 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 RPIAP49247 311 aa8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 CCDC27Q2M243 656 aa8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 NPHP4O75161 1426 aaPredicted RBP8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 SETD1AO15047 1707 aaKnown RBP8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 TMEM2Q9UHN6 1383 aa8.6□□□□□ -1.03
TMEM39A-212ENST00000497993 NRXN3Q9Y4C0 1643 aa8.59□□□□□ -1.03
TMEM39A-212ENST00000497993 PPLO60437 1756 aa8.59□□□□□ -1.03
TMEM39A-212ENST00000497993 CTHP32929 405 aa8.59□□□□□ -1.03
TMEM39A-212ENST00000497993 LRRN4Q8WUT4 740 aa8.59□□□□□ -1.03
TMEM39A-212ENST00000497993 CALR3Q96L12 384 aaKnown RBP8.59□□□□□ -1.03
TMEM39A-212ENST00000497993 SLC52A1Q9NWF4 448 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms