RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 ZBBXA8MT70 800 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 ALDH1A1P00352 501 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 TRAF7Q6Q0C0 670 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
LMBR1-215ENST00000461603 WASF2Q9Y6W5 498 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 CDC42BPBQ9Y5S2 1711 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 ITSN2Q9NZM3 1697 aa9.04□□□□□ -0.96
LMBR1-215ENST00000461603 MCM6Q14566 821 aa9.03□□□□□ -0.96
LMBR1-215ENST00000461603 CDK11AQ9UQ88 783 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-215ENST00000461603 ABCC1P33527 1531 aa9.03□□□□□ -0.96
LMBR1-215ENST00000461603 TROQ12816 1431 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-215ENST00000461603 CLTCQ00610 1675 aaKnown RBP9.03□□□□□ -0.96
LMBR1-215ENST00000461603 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
LMBR1-215ENST00000461603 CPS1P31327 1500 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 J3QL48 77 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 CLIP1P30622 1438 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 MYT1Q01538 1121 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 NR1H3Q13133 447 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 NBPF20Q3BBV1 942 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 ADAM32Q8TC27 787 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 PREX2Q70Z35 1606 aa9.01□□□□□ -0.97
LMBR1-215ENST00000461603 PTPRKQ15262 1439 aa9□□□□□ -0.97
LMBR1-215ENST00000461603 SEPT12Q8IYM1 358 aa9□□□□□ -0.97
LMBR1-215ENST00000461603 OCSTAMPQ9BR26 566 aa9□□□□□ -0.97
LMBR1-215ENST00000461603 TLL2Q9Y6L7 1015 aa9□□□□□ -0.97
LMBR1-215ENST00000461603 ALKQ9UM73 1620 aa9□□□□□ -0.97
LMBR1-215ENST00000461603 SHANK2Q9UPX8 1470 aa9□□□□□ -0.97
LMBR1-215ENST00000461603 FMN1Q68DA7 1419 aa8.99□□□□□ -0.97
LMBR1-215ENST00000461603 GPR37L1O60883 481 aa8.99□□□□□ -0.97
LMBR1-215ENST00000461603 GRM5P41594 1212 aa8.99□□□□□ -0.97
LMBR1-215ENST00000461603 POLR1AO95602 1720 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-215ENST00000461603 SAMD9LQ8IVG5 1584 aa8.99□□□□□ -0.97
LMBR1-215ENST00000461603 NEURL4Q96JN8 1562 aa8.99□□□□□ -0.97
LMBR1-215ENST00000461603 DNMT1P26358 1616 aaKnown RBP8.98□□□□□ -0.97
LMBR1-215ENST00000461603 A2ML1A8K2U0 1454 aa8.98□□□□□ -0.97
LMBR1-215ENST00000461603 LRRIQ1Q96JM4 1722 aa8.98□□□□□ -0.97
LMBR1-215ENST00000461603 DHX9Q08211 1270 aaKnown RBP8.98□□□□□ -0.97
LMBR1-215ENST00000461603 WASHC4Q2M389 1173 aa8.98□□□□□ -0.97
LMBR1-215ENST00000461603 VASH1Q7L8A9 365 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-215ENST00000461603 CARD14Q9BXL6 1004 aa8.98□□□□□ -0.97
LMBR1-215ENST00000461603 RGS17Q9UGC6 210 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-215ENST00000461603 AXIN1O15169 862 aa8.97□□□□□ -0.97
LMBR1-215ENST00000461603 NNTQ13423 1086 aa8.97□□□□□ -0.97
LMBR1-215ENST00000461603 GGT6Q6P531 493 aa8.97□□□□□ -0.97
LMBR1-215ENST00000461603 WWC1Q8IX03 1113 aa8.97□□□□□ -0.97
LMBR1-215ENST00000461603 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
LMBR1-215ENST00000461603 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
LMBR1-215ENST00000461603 HPS1Q92902 700 aa8.96□□□□□ -0.98
LMBR1-215ENST00000461603 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
LMBR1-215ENST00000461603 ZNF777Q9ULD5 760 aaPredicted RBP8.96□□□□□ -0.98
LMBR1-215ENST00000461603 EMILIN1Q9Y6C2 1016 aa8.96□□□□□ -0.98
LMBR1-215ENST00000461603 SPAG9O60271 1321 aaKnown RBP8.96□□□□□ -0.98
LMBR1-215ENST00000461603 CDC42BPAQ5VT25 1732 aa8.96□□□□□ -0.98
LMBR1-215ENST00000461603 SYCP2Q9BX26 1530 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 VWDEQ8N2E2 1590 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 SOX11P35716 441 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 KCTD15Q96SI1 283 aaPredicted RBP8.95□□□□□ -0.98
LMBR1-215ENST00000461603 KLF16Q9BXK1 252 aaPredicted RBP8.95□□□□□ -0.98
LMBR1-215ENST00000461603 TBC1D2BQ9UPU7 963 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 EEA1Q15075 1411 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 ARHGAP35Q9NRY4 1499 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 ATP7AQ04656 1500 aa8.95□□□□□ -0.98
LMBR1-215ENST00000461603 ESPNB1AK53 854 aa8.94□□□□□ -0.98
LMBR1-215ENST00000461603 RAD21O60216 631 aa8.94□□□□□ -0.98
LMBR1-215ENST00000461603 RNF20Q5VTR2 975 aa8.94□□□□□ -0.98
LMBR1-215ENST00000461603 CCDC116Q8IYX3 515 aa8.94□□□□□ -0.98
LMBR1-215ENST00000461603 A2MP01023 1474 aa8.94□□□□□ -0.98
LMBR1-215ENST00000461603 LCE2BO14633 110 aa8.93□□□□□ -0.98
LMBR1-215ENST00000461603 HNRNPMP52272 730 aaKnown RBP eCLIP8.93□□□□□ -0.987e-7■■■■■ 34.7
LMBR1-215ENST00000461603 EIF4G2P78344 907 aaKnown RBP eCLIP8.93□□□□□ -0.98
LMBR1-215ENST00000461603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.93□□□□□ -0.98
LMBR1-215ENST00000461603 SRCAPQ6ZRS2 3230 aa8.93□□□□□ -0.98
LMBR1-215ENST00000461603 RNF17Q9BXT8 1623 aaKnown RBP8.92□□□□□ -0.98
LMBR1-215ENST00000461603 INO80Q9ULG1 1556 aaPredicted RBP8.92□□□□□ -0.98
LMBR1-215ENST00000461603 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
LMBR1-215ENST00000461603 FSHRP23945 695 aa8.92□□□□□ -0.98
LMBR1-215ENST00000461603 POTEAQ6S8J7 498 aa8.92□□□□□ -0.98
LMBR1-215ENST00000461603 ANKLE2Q86XL3 938 aa8.92□□□□□ -0.98
LMBR1-215ENST00000461603 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
LMBR1-215ENST00000461603 COG6Q9Y2V7 657 aa8.92□□□□□ -0.98
LMBR1-215ENST00000461603 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
LMBR1-215ENST00000461603 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
LMBR1-215ENST00000461603 TNRQ92752 1358 aa8.91□□□□□ -0.98
LMBR1-215ENST00000461603 TIMP2P16035 220 aa8.91□□□□□ -0.98
LMBR1-215ENST00000461603 UBTFP17480 764 aaKnown RBP8.91□□□□□ -0.98
LMBR1-215ENST00000461603 IRF5Q13568 498 aa8.91□□□□□ -0.98
LMBR1-215ENST00000461603 GDPD2Q9HCC8 539 aa8.91□□□□□ -0.98
LMBR1-215ENST00000461603 SETD1AO15047 1707 aaKnown RBP8.91□□□□□ -0.98
LMBR1-215ENST00000461603 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.98
LMBR1-215ENST00000461603 NR3C2P08235 984 aa8.9□□□□□ -0.98
LMBR1-215ENST00000461603 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
LMBR1-215ENST00000461603 IQGAP1P46940 1657 aa8.89□□□□□ -0.99
LMBR1-215ENST00000461603 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
LMBR1-215ENST00000461603 INTS6LQ5JSJ4 861 aaKnown RBP8.89□□□□□ -0.99
LMBR1-215ENST00000461603 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
LMBR1-215ENST00000461603 PCDHB9Q9Y5E1 797 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms