RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
DDR1-239ENST00000452441 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
DDR1-239ENST00000452441 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
DDR1-239ENST00000452441 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
DDR1-239ENST00000452441 RIC3Q7Z5B4 369 aa13.59□□□□□ -0.23
DDR1-239ENST00000452441 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
DDR1-239ENST00000452441 SLC39A6Q13433 755 aa13.58□□□□□ -0.24
DDR1-239ENST00000452441 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
DDR1-239ENST00000452441 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 GOLGA6L4A6NEF3 574 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 RBM10P98175 930 aaKnown RBP13.57□□□□□ -0.24
DDR1-239ENST00000452441 FLIIQ13045 1269 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 PLEKHO1Q53GL0 409 aaPredicted RBP13.57□□□□□ -0.24
DDR1-239ENST00000452441 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 FIBPO43427 364 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
DDR1-239ENST00000452441 PLEKHM2Q8IWE5 1019 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 SNX21Q969T3 373 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 LRRCC1Q9C099 1032 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 PHAXQ9H814 394 aaKnown RBP13.57□□□□□ -0.24
DDR1-239ENST00000452441 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 SYCE3A1L190 88 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 STK3Q13188 491 aa13.57□□□□□ -0.24
DDR1-239ENST00000452441 CPA1P15085 419 aa13.56□□□□□ -0.24
DDR1-239ENST00000452441 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
DDR1-239ENST00000452441 GAS2L3Q86XJ1 694 aa13.56□□□□□ -0.24
DDR1-239ENST00000452441 ERC2O15083 957 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 GNAI3P08754 354 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
DDR1-239ENST00000452441 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 FERMT3Q86UX7 667 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
DDR1-239ENST00000452441 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 TOM1L2Q6ZVM7 507 aa13.55□□□□□ -0.24
DDR1-239ENST00000452441 ESPNB1AK53 854 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 FAM13BQ9NYF5 915 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 CLTCQ00610 1675 aaKnown RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 ANKRD26Q9UPS8 1709 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 HSP90B1P14625 803 aaKnown RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 CEBPZQ03701 1054 aaKnown RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 CLCN1P35523 988 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
DDR1-239ENST00000452441 RABEP1Q15276 862 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 KIF2CQ99661 725 aa13.54□□□□□ -0.24
DDR1-239ENST00000452441 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 MED14O60244 1454 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
DDR1-239ENST00000452441 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 NEXNQ0ZGT2 675 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
DDR1-239ENST00000452441 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
DDR1-239ENST00000452441 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
DDR1-239ENST00000452441 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
DDR1-239ENST00000452441 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.24
DDR1-239ENST00000452441 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.24
DDR1-239ENST00000452441 A2ML1A8K2U0 1454 aa13.52□□□□□ -0.24
DDR1-239ENST00000452441 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.25
DDR1-239ENST00000452441 MX1P20591 662 aa13.52□□□□□ -0.25
DDR1-239ENST00000452441 RPAP2Q8IXW5 612 aaPredicted RBP13.52□□□□□ -0.25
DDR1-239ENST00000452441 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
DDR1-239ENST00000452441 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
DDR1-239ENST00000452441 HOXC9P31274 260 aa13.52□□□□□ -0.25
DDR1-239ENST00000452441 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
DDR1-239ENST00000452441 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
DDR1-239ENST00000452441 MAP2P11137 1827 aaKnown RBP13.51□□□□□ -0.25
DDR1-239ENST00000452441 NUCB2P80303 420 aa13.51□□□□□ -0.25
DDR1-239ENST00000452441 MSH6P52701 1360 aa13.51□□□□□ -0.25
DDR1-239ENST00000452441 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDR1-239ENST00000452441 CPS1P31327 1500 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 DDIT3P35638 169 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
DDR1-239ENST00000452441 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 PDE1AP54750 535 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 UBE2Q2Q8WVN8 375 aa13.5□□□□□ -0.25
DDR1-239ENST00000452441 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 KCNQ3O43525 872 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
DDR1-239ENST00000452441 ANKRD44Q8N8A2 993 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 ARHGAP45Q92619 1136 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 AK9Q5TCS8 1911 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 TATP17735 454 aaPredicted RBP13.49□□□□□ -0.25
DDR1-239ENST00000452441 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms