RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
SNHG3-202ENST00000437681 RTF1Q92541 710 aaKnown RBP15.12■□□□□ 0.01
SNHG3-202ENST00000437681 PHACTR3Q96KR7 559 aa15.12■□□□□ 0.01
SNHG3-202ENST00000437681 TMOD3Q9NYL9 352 aa15.12■□□□□ 0.01
SNHG3-202ENST00000437681 COL5A3P25940 1745 aaPredicted RBP15.12■□□□□ 0.01
SNHG3-202ENST00000437681 TMPOP42166 694 aaKnown RBP15.12■□□□□ 0.01
SNHG3-202ENST00000437681 CAMKK2Q96RR4 588 aa15.11■□□□□ 0.01
SNHG3-202ENST00000437681 IL16Q14005 1332 aa15.11■□□□□ 0.01
SNHG3-202ENST00000437681 CABP4P57796 275 aa15.11■□□□□ 0.01
SNHG3-202ENST00000437681 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
SNHG3-202ENST00000437681 LAMB4A4D0S4 1761 aa15.1■□□□□ 0.01
SNHG3-202ENST00000437681 SOS1Q07889 1333 aaPredicted RBP15.1■□□□□ 0.01
SNHG3-202ENST00000437681 TRIM37O94972 964 aa15.1■□□□□ 0.01
SNHG3-202ENST00000437681 PRIM1P49642 420 aaKnown RBP15.09■□□□□ 0.01
SNHG3-202ENST00000437681 KCPQ6ZWJ8 1503 aa15.09■□□□□ 0.01
SNHG3-202ENST00000437681 TJP1Q07157 1748 aa15.08■□□□□ 0
SNHG3-202ENST00000437681 APBA3O96018 575 aa15.08■□□□□ 0
SNHG3-202ENST00000437681 IL17REQ8NFR9 667 aa15.08■□□□□ 0
SNHG3-202ENST00000437681 PIGBQ92521 554 aa15.08■□□□□ 0
SNHG3-202ENST00000437681 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
SNHG3-202ENST00000437681 PALLDQ8WX93 1383 aa15.07■□□□□ 0
SNHG3-202ENST00000437681 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
SNHG3-202ENST00000437681 RIPK4P57078 832 aa15.06■□□□□ 0
SNHG3-202ENST00000437681 TEFQ10587 303 aa15.06■□□□□ 0
SNHG3-202ENST00000437681 TAF7Q15545 349 aaPredicted RBP15.06■□□□□ 0
SNHG3-202ENST00000437681 CCDC184Q52MB2 194 aa15.06■□□□□ 0
SNHG3-202ENST00000437681 CHMP4AQ9BY43 222 aa15.06■□□□□ 0
SNHG3-202ENST00000437681 MPRIPQ6WCQ1 1025 aa15.05■□□□□ 0
SNHG3-202ENST00000437681 WDR63Q8IWG1 891 aa15.05■□□□□ 0
SNHG3-202ENST00000437681 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
SNHG3-202ENST00000437681 ATG3Q9NT62 314 aa15.04■□□□□ -0
SNHG3-202ENST00000437681 C4BP0C0L5 1744 aa15.04■□□□□ -0
SNHG3-202ENST00000437681 HEG1Q9ULI3 1381 aa15.04■□□□□ -0
SNHG3-202ENST00000437681 KCNQ2O43526 872 aa15.04■□□□□ -0
SNHG3-202ENST00000437681 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
SNHG3-202ENST00000437681 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
SNHG3-202ENST00000437681 LGR6Q9HBX8 967 aa15.03■□□□□ -0
SNHG3-202ENST00000437681 IFT57Q9NWB7 429 aa15.03■□□□□ -0
SNHG3-202ENST00000437681 RGL2O15211 777 aa15.03■□□□□ -0
SNHG3-202ENST00000437681 HOXB7P09629 217 aa15.02■□□□□ -0
SNHG3-202ENST00000437681 CNTNAP4Q9C0A0 1308 aa15.02■□□□□ -0
SNHG3-202ENST00000437681 TXNRD1Q16881 649 aa15.02□□□□□ -0.01
SNHG3-202ENST00000437681 FAM182BQ5T319 152 aa15.02□□□□□ -0.01
SNHG3-202ENST00000437681 NBPF14Q5TI25 921 aa15.02□□□□□ -0.01
SNHG3-202ENST00000437681 NFATC2IPQ8NCF5 419 aa15.02□□□□□ -0.01
SNHG3-202ENST00000437681 ZNF853P0CG23 659 aa15.01□□□□□ -0.01
SNHG3-202ENST00000437681 FLAD1Q8NFF5 587 aa15.01□□□□□ -0.01
SNHG3-202ENST00000437681 CASZ1Q86V15 1759 aa15.01□□□□□ -0.01
SNHG3-202ENST00000437681 GNAI1P63096 354 aa15.01□□□□□ -0.01
SNHG3-202ENST00000437681 CHL1O00533 1208 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 APAF1O14727 1248 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 ZNF790Q6PG37 636 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 MIER1Q8N108 512 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 CFAP44Q96MT7 982 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 ERBB4Q15303 1308 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 UBR3Q6ZT12 1888 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 BTBD11A6QL63 1104 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 FMNL2Q96PY5 1086 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 KAT6BQ8WYB5 2073 aa15□□□□□ -0.01
SNHG3-202ENST00000437681 LOC102724428A0A0B4J2F2 783 aa14.99□□□□□ -0.01
SNHG3-202ENST00000437681 SIK1P57059 783 aa14.99□□□□□ -0.01
SNHG3-202ENST00000437681 CCDC146Q8IYE0 955 aa14.99□□□□□ -0.01
SNHG3-202ENST00000437681 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
SNHG3-202ENST00000437681 ZNF521Q96K83 1311 aa14.99□□□□□ -0.01
SNHG3-202ENST00000437681 TUBGCP6Q96RT7 1819 aa14.99□□□□□ -0.01
SNHG3-202ENST00000437681 ADRA2BP18089 450 aa14.98□□□□□ -0.01
SNHG3-202ENST00000437681 EN1Q05925 392 aaPredicted RBP14.98□□□□□ -0.01
SNHG3-202ENST00000437681 PROM2Q8N271 834 aa14.98□□□□□ -0.01
SNHG3-202ENST00000437681 CCNL1Q9UK58 526 aaPredicted RBP14.98□□□□□ -0.01
SNHG3-202ENST00000437681 EZH2Q15910 746 aaKnown RBP14.97□□□□□ -0.01
SNHG3-202ENST00000437681 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
SNHG3-202ENST00000437681 WWC1Q8IX03 1113 aa14.97□□□□□ -0.01
SNHG3-202ENST00000437681 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
SNHG3-202ENST00000437681 CACNA1FO60840 1977 aa14.97□□□□□ -0.01
SNHG3-202ENST00000437681 MCM10Q7L590 875 aa14.96□□□□□ -0.01
SNHG3-202ENST00000437681 STK32BQ9NY57 414 aa14.96□□□□□ -0.01
SNHG3-202ENST00000437681 LRP5O75197 1615 aa14.95□□□□□ -0.02
SNHG3-202ENST00000437681 SNRPA1P09661 255 aaKnown RBP14.95□□□□□ -0.02
SNHG3-202ENST00000437681 PTF1AQ7RTS3 328 aa14.95□□□□□ -0.02
SNHG3-202ENST00000437681 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
SNHG3-202ENST00000437681 SLC16A10Q8TF71 515 aa14.95□□□□□ -0.02
SNHG3-202ENST00000437681 SSFA2P28290 1259 aa14.95□□□□□ -0.02
SNHG3-202ENST00000437681 STARD3NLO95772 234 aa14.94□□□□□ -0.02
SNHG3-202ENST00000437681 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
SNHG3-202ENST00000437681 DEFB132Q7Z7B7 95 aa14.94□□□□□ -0.02
SNHG3-202ENST00000437681 ATP6V1AP38606 617 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 SLC15A2Q16348 729 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 A0A087WZG4 1122 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 CT47B1P0C2W7 299 aaPredicted RBP14.93□□□□□ -0.02
SNHG3-202ENST00000437681 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 TSPYL4Q9UJ04 414 aa14.93□□□□□ -0.02
SNHG3-202ENST00000437681 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
SNHG3-202ENST00000437681 SCN7AQ01118 1682 aa14.92□□□□□ -0.02
SNHG3-202ENST00000437681 C4AP0C0L4 1744 aa14.91□□□□□ -0.02
SNHG3-202ENST00000437681 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
SNHG3-202ENST00000437681 CYP19A1P11511 503 aaPredicted RBP14.91□□□□□ -0.02
SNHG3-202ENST00000437681 E9PSI1 815 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms