RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 EXOC5O00471 708 aa18.51■□□□□ 0.55
SSX2IP-202ENST00000422026 SLC52A2Q9HAB3 445 aa18.51■□□□□ 0.55
SSX2IP-202ENST00000422026 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
SSX2IP-202ENST00000422026 VAMP4O75379 141 aa18.5■□□□□ 0.55
SSX2IP-202ENST00000422026 FKBP8Q14318 412 aa18.5■□□□□ 0.55
SSX2IP-202ENST00000422026 KIF16BQ96L93 1317 aa18.49■□□□□ 0.55
SSX2IP-202ENST00000422026 HOXB7P09629 217 aa18.49■□□□□ 0.55
SSX2IP-202ENST00000422026 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
SSX2IP-202ENST00000422026 BRPF1P55201 1214 aaPredicted RBP18.49■□□□□ 0.55
SSX2IP-202ENST00000422026 SMC4Q9NTJ3 1288 aa18.49■□□□□ 0.55
SSX2IP-202ENST00000422026 MS4A1P11836 297 aa18.48■□□□□ 0.55
SSX2IP-202ENST00000422026 CABP4P57796 275 aa18.47■□□□□ 0.55
SSX2IP-202ENST00000422026 DDB1Q16531 1140 aa18.47■□□□□ 0.55
SSX2IP-202ENST00000422026 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
SSX2IP-202ENST00000422026 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
SSX2IP-202ENST00000422026 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
SSX2IP-202ENST00000422026 BCAR3O75815 825 aa18.46■□□□□ 0.55
SSX2IP-202ENST00000422026 MIS18AQ9NYP9 233 aa18.46■□□□□ 0.55
SSX2IP-202ENST00000422026 AFF2P51816 1311 aa18.46■□□□□ 0.55
SSX2IP-202ENST00000422026 PDE3AQ14432 1141 aa18.45■□□□□ 0.54
SSX2IP-202ENST00000422026 TSPYL6Q8N831 410 aa18.45■□□□□ 0.54
SSX2IP-202ENST00000422026 FBXO41Q8TF61 875 aa18.45■□□□□ 0.54
SSX2IP-202ENST00000422026 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
SSX2IP-202ENST00000422026 TRPC5Q9UL62 973 aaPredicted RBP18.45■□□□□ 0.54
SSX2IP-202ENST00000422026 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
SSX2IP-202ENST00000422026 ZKSCAN2Q63HK3 967 aa18.44■□□□□ 0.54
SSX2IP-202ENST00000422026 ATRNO75882 1429 aa18.43■□□□□ 0.54
SSX2IP-202ENST00000422026 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
SSX2IP-202ENST00000422026 TTC5Q8N0Z6 440 aa18.43■□□□□ 0.54
SSX2IP-202ENST00000422026 CCDC30Q5VVM6 783 aa18.42■□□□□ 0.54
SSX2IP-202ENST00000422026 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
SSX2IP-202ENST00000422026 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
SSX2IP-202ENST00000422026 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
SSX2IP-202ENST00000422026 PLIN1O60240 522 aa18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 GJD4Q96KN9 370 aaPredicted RBP18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 BCL2L13Q9BXK5 485 aa18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
SSX2IP-202ENST00000422026 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
SSX2IP-202ENST00000422026 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
SSX2IP-202ENST00000422026 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
SSX2IP-202ENST00000422026 HEG1Q9ULI3 1381 aa18.4■□□□□ 0.54
SSX2IP-202ENST00000422026 PAPPAQ13219 1627 aa18.39■□□□□ 0.53
SSX2IP-202ENST00000422026 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
SSX2IP-202ENST00000422026 PIAS4Q8N2W9 510 aaPredicted RBP18.39■□□□□ 0.53
SSX2IP-202ENST00000422026 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
SSX2IP-202ENST00000422026 GLI3P10071 1580 aa18.38■□□□□ 0.53
SSX2IP-202ENST00000422026 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
SSX2IP-202ENST00000422026 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
SSX2IP-202ENST00000422026 FTSJ3Q8IY81 847 aaKnown RBP18.38■□□□□ 0.53
SSX2IP-202ENST00000422026 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
SSX2IP-202ENST00000422026 PTPRCP08575 1304 aa18.38■□□□□ 0.53
SSX2IP-202ENST00000422026 AAMPQ13685 434 aa18.37■□□□□ 0.53
SSX2IP-202ENST00000422026 HDGFL1Q5TGJ6 251 aa18.37■□□□□ 0.53
SSX2IP-202ENST00000422026 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
SSX2IP-202ENST00000422026 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
SSX2IP-202ENST00000422026 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
SSX2IP-202ENST00000422026 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
SSX2IP-202ENST00000422026 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
SSX2IP-202ENST00000422026 A0A0G2JS52 829 aa18.35■□□□□ 0.53
SSX2IP-202ENST00000422026 KCNQ3O43525 872 aa18.35■□□□□ 0.53
SSX2IP-202ENST00000422026 ONECUT3O60422 494 aaPredicted RBP18.35■□□□□ 0.53
SSX2IP-202ENST00000422026 MYT1Q01538 1121 aa18.35■□□□□ 0.53
SSX2IP-202ENST00000422026 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
SSX2IP-202ENST00000422026 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
SSX2IP-202ENST00000422026 BCL9O00512 1426 aa18.34■□□□□ 0.53
SSX2IP-202ENST00000422026 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
SSX2IP-202ENST00000422026 TRIM27P14373 513 aa18.34■□□□□ 0.53
SSX2IP-202ENST00000422026 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
SSX2IP-202ENST00000422026 DOT1LQ8TEK3 1739 aa18.34■□□□□ 0.53
SSX2IP-202ENST00000422026 SLC4A2P04920 1241 aa18.33■□□□□ 0.52
SSX2IP-202ENST00000422026 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
SSX2IP-202ENST00000422026 MARCH10Q8NA82 808 aaPredicted RBP18.33■□□□□ 0.52
SSX2IP-202ENST00000422026 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
SSX2IP-202ENST00000422026 QTRT2Q9H974 415 aaKnown RBP18.33■□□□□ 0.52
SSX2IP-202ENST00000422026 ITGB4P16144 1822 aa18.33■□□□□ 0.52
SSX2IP-202ENST00000422026 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
SSX2IP-202ENST00000422026 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
SSX2IP-202ENST00000422026 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
SSX2IP-202ENST00000422026 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
SSX2IP-202ENST00000422026 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
SSX2IP-202ENST00000422026 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
SSX2IP-202ENST00000422026 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
SSX2IP-202ENST00000422026 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
SSX2IP-202ENST00000422026 PIGBQ92521 554 aa18.31■□□□□ 0.52
SSX2IP-202ENST00000422026 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
SSX2IP-202ENST00000422026 MVPQ14764 893 aaKnown RBP18.3■□□□□ 0.52
SSX2IP-202ENST00000422026 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
SSX2IP-202ENST00000422026 DDX19BQ9UMR2 479 aa18.3■□□□□ 0.52
SSX2IP-202ENST00000422026 ABCC4O15439 1325 aa18.29■□□□□ 0.52
SSX2IP-202ENST00000422026 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
SSX2IP-202ENST00000422026 PANK1Q8TE04 598 aa18.29■□□□□ 0.52
SSX2IP-202ENST00000422026 C5P01031 1676 aa18.28■□□□□ 0.52
SSX2IP-202ENST00000422026 PRIM1P49642 420 aaKnown RBP18.28■□□□□ 0.52
SSX2IP-202ENST00000422026 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
SSX2IP-202ENST00000422026 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
SSX2IP-202ENST00000422026 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
SSX2IP-202ENST00000422026 RBM6P78332 1123 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms