RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
SSX2IP-202ENST00000422026 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
SSX2IP-202ENST00000422026 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
SSX2IP-202ENST00000422026 ABCC9O60706 1549 aa27.65■■■□□ 2.02
SSX2IP-202ENST00000422026 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
SSX2IP-202ENST00000422026 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
SSX2IP-202ENST00000422026 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
SSX2IP-202ENST00000422026 NACADO15069 1562 aa27.26■■□□□ 1.95
SSX2IP-202ENST00000422026 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
SSX2IP-202ENST00000422026 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
SSX2IP-202ENST00000422026 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
SSX2IP-202ENST00000422026 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
SSX2IP-202ENST00000422026 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
SSX2IP-202ENST00000422026 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
SSX2IP-202ENST00000422026 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
SSX2IP-202ENST00000422026 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
SSX2IP-202ENST00000422026 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
SSX2IP-202ENST00000422026 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
SSX2IP-202ENST00000422026 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
SSX2IP-202ENST00000422026 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
SSX2IP-202ENST00000422026 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
SSX2IP-202ENST00000422026 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
SSX2IP-202ENST00000422026 WIZO95785 1651 aa25.33■■□□□ 1.65
SSX2IP-202ENST00000422026 SMARCA2P51531 1590 aa25.3■■□□□ 1.64
SSX2IP-202ENST00000422026 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
SSX2IP-202ENST00000422026 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
SSX2IP-202ENST00000422026 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
SSX2IP-202ENST00000422026 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
SSX2IP-202ENST00000422026 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
SSX2IP-202ENST00000422026 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
SSX2IP-202ENST00000422026 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
SSX2IP-202ENST00000422026 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
SSX2IP-202ENST00000422026 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
SSX2IP-202ENST00000422026 CFTRP13569 1480 aa24.45■■□□□ 1.5
SSX2IP-202ENST00000422026 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
SSX2IP-202ENST00000422026 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
SSX2IP-202ENST00000422026 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
SSX2IP-202ENST00000422026 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
SSX2IP-202ENST00000422026 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
SSX2IP-202ENST00000422026 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
SSX2IP-202ENST00000422026 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
SSX2IP-202ENST00000422026 NESP48681 1621 aa24.14■■□□□ 1.46
SSX2IP-202ENST00000422026 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
SSX2IP-202ENST00000422026 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
SSX2IP-202ENST00000422026 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
SSX2IP-202ENST00000422026 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
SSX2IP-202ENST00000422026 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
SSX2IP-202ENST00000422026 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
SSX2IP-202ENST00000422026 CUX1P39880 1505 aa23.94■■□□□ 1.42
SSX2IP-202ENST00000422026 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
SSX2IP-202ENST00000422026 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
SSX2IP-202ENST00000422026 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
SSX2IP-202ENST00000422026 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
SSX2IP-202ENST00000422026 MRC2Q9UBG0 1479 aa23.82■■□□□ 1.4
SSX2IP-202ENST00000422026 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
SSX2IP-202ENST00000422026 EEA1Q15075 1411 aa23.79■■□□□ 1.4
SSX2IP-202ENST00000422026 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
SSX2IP-202ENST00000422026 WDR62O43379 1518 aa23.71■■□□□ 1.39
SSX2IP-202ENST00000422026 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
SSX2IP-202ENST00000422026 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
SSX2IP-202ENST00000422026 SOGA1O94964 1423 aa23.66■■□□□ 1.38
SSX2IP-202ENST00000422026 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
SSX2IP-202ENST00000422026 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
SSX2IP-202ENST00000422026 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
SSX2IP-202ENST00000422026 CUX2O14529 1486 aa23.55■■□□□ 1.36
SSX2IP-202ENST00000422026 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
SSX2IP-202ENST00000422026 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
SSX2IP-202ENST00000422026 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
SSX2IP-202ENST00000422026 WDR97A6NE52 1622 aa23.52■■□□□ 1.36
SSX2IP-202ENST00000422026 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
SSX2IP-202ENST00000422026 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
SSX2IP-202ENST00000422026 KIF21BO75037 1637 aa23.43■■□□□ 1.34
SSX2IP-202ENST00000422026 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
SSX2IP-202ENST00000422026 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
SSX2IP-202ENST00000422026 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
SSX2IP-202ENST00000422026 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
SSX2IP-202ENST00000422026 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
SSX2IP-202ENST00000422026 IGF1RP08069 1367 aa23.34■■□□□ 1.33
SSX2IP-202ENST00000422026 CUL7Q14999 1698 aa23.32■■□□□ 1.32
SSX2IP-202ENST00000422026 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
SSX2IP-202ENST00000422026 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
SSX2IP-202ENST00000422026 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
SSX2IP-202ENST00000422026 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
SSX2IP-202ENST00000422026 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
SSX2IP-202ENST00000422026 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
SSX2IP-202ENST00000422026 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
SSX2IP-202ENST00000422026 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
SSX2IP-202ENST00000422026 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.315e-9■■□□□ 12.1
SSX2IP-202ENST00000422026 TNIKQ9UKE5 1360 aa23.22■■□□□ 1.31
SSX2IP-202ENST00000422026 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
SSX2IP-202ENST00000422026 FHAD1B1AJZ9 1412 aa23.15■■□□□ 1.3
SSX2IP-202ENST00000422026 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
SSX2IP-202ENST00000422026 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
SSX2IP-202ENST00000422026 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
SSX2IP-202ENST00000422026 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.29
SSX2IP-202ENST00000422026 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
SSX2IP-202ENST00000422026 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
SSX2IP-202ENST00000422026 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
SSX2IP-202ENST00000422026 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
SSX2IP-202ENST00000422026 CLIP1P30622 1438 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms