RNA–Protein interactions for RNA: ENST00000396819.7

LTBP4-205, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-205ENST00000396819 ZSCAN25Q6NSZ9 544 aa20.36■□□□□ 0.85
LTBP4-205ENST00000396819 ABCF2Q9UG63 623 aa20.36■□□□□ 0.85
LTBP4-205ENST00000396819 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
LTBP4-205ENST00000396819 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
LTBP4-205ENST00000396819 COL17A1Q9UMD9 1497 aaPredicted RBP20.36■□□□□ 0.85
LTBP4-205ENST00000396819 IFIT1P09914 478 aaKnown RBP20.35■□□□□ 0.85
LTBP4-205ENST00000396819 DCAF5Q96JK2 942 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 AKAP2Q9Y2D5 859 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 UBE3BQ7Z3V4 1068 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 IKQ13123 557 aaPredicted RBP20.35■□□□□ 0.85
LTBP4-205ENST00000396819 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
LTBP4-205ENST00000396819 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
LTBP4-205ENST00000396819 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
LTBP4-205ENST00000396819 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
LTBP4-205ENST00000396819 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
LTBP4-205ENST00000396819 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 ANKIB1Q9P2G1 1089 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 TCEAL9Q9UHQ7 104 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 HECW2Q9P2P5 1572 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 METP08581 1390 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 NEK4P51957 841 aa20.34■□□□□ 0.85
LTBP4-205ENST00000396819 SAFBQ15424 915 aaKnown RBP eCLIP20.34■□□□□ 0.85
LTBP4-205ENST00000396819 COPS6Q7L5N1 327 aa20.33■□□□□ 0.85
LTBP4-205ENST00000396819 ADGBQ8N7X0 1667 aa20.33■□□□□ 0.85
LTBP4-205ENST00000396819 TPM4P67936 248 aa20.33■□□□□ 0.85
LTBP4-205ENST00000396819 ANKRD18BA2A2Z9 1011 aa20.33■□□□□ 0.84
LTBP4-205ENST00000396819 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.84
LTBP4-205ENST00000396819 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
LTBP4-205ENST00000396819 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.84
LTBP4-205ENST00000396819 ARHGEF10O15013 1369 aa20.33■□□□□ 0.84
LTBP4-205ENST00000396819 CREBRFQ8IUR6 639 aa20.32■□□□□ 0.84
LTBP4-205ENST00000396819 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
LTBP4-205ENST00000396819 CAVIN4Q5BKX8 364 aa20.32■□□□□ 0.84
LTBP4-205ENST00000396819 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
LTBP4-205ENST00000396819 FOSBP53539 338 aa20.31■□□□□ 0.84
LTBP4-205ENST00000396819 NPHP4O75161 1426 aaPredicted RBP20.31■□□□□ 0.84
LTBP4-205ENST00000396819 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
LTBP4-205ENST00000396819 UGGT1Q9NYU2 1555 aa20.31■□□□□ 0.84
LTBP4-205ENST00000396819 DDX49Q9Y6V7 483 aaKnown RBP20.31■□□□□ 0.84
LTBP4-205ENST00000396819 SBNO1A3KN83 1393 aa20.31■□□□□ 0.84
LTBP4-205ENST00000396819 STK11IPQ8N1F8 1099 aa20.3■□□□□ 0.84
LTBP4-205ENST00000396819 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
LTBP4-205ENST00000396819 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
LTBP4-205ENST00000396819 LDHAL6AQ6ZMR3 332 aa20.29■□□□□ 0.84
LTBP4-205ENST00000396819 CDCA7Q9BWT1 371 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 DDX11L8A8MPP1 907 aa20.29■□□□□ 0.84
LTBP4-205ENST00000396819 GLRX3O76003 335 aaKnown RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
LTBP4-205ENST00000396819 NBPF5PQ86XG9 351 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
LTBP4-205ENST00000396819 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 MAP3K5Q99683 1374 aa20.29■□□□□ 0.84
LTBP4-205ENST00000396819 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
LTBP4-205ENST00000396819 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 ZSCAN29Q8IWY8 852 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-205ENST00000396819 PIK3C2GO75747 1445 aa20.28■□□□□ 0.84
LTBP4-205ENST00000396819 RSPH6AQ9H0K4 717 aa20.28■□□□□ 0.84
LTBP4-205ENST00000396819 MX1P20591 662 aa20.27■□□□□ 0.84
LTBP4-205ENST00000396819 BOLA2Q9H3K6 86 aa20.27■□□□□ 0.84
LTBP4-205ENST00000396819 ERVK-7P63135 1459 aa20.27■□□□□ 0.84
LTBP4-205ENST00000396819 CDC5LQ99459 802 aaKnown RBP20.27■□□□□ 0.84
LTBP4-205ENST00000396819 CCDC8Q9H0W5 538 aaPredicted RBP20.27■□□□□ 0.84
LTBP4-205ENST00000396819 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.83
LTBP4-205ENST00000396819 IL13P35225 146 aa20.27■□□□□ 0.83
LTBP4-205ENST00000396819 DDX46Q7L014 1031 aaKnown RBP20.27■□□□□ 0.83
LTBP4-205ENST00000396819 CHMP5Q9NZZ3 219 aa20.27■□□□□ 0.83
LTBP4-205ENST00000396819 PTPRTO14522 1441 aa20.26■□□□□ 0.83
LTBP4-205ENST00000396819 XBP1P17861 261 aa20.26■□□□□ 0.83
LTBP4-205ENST00000396819 TDO2P48775 406 aa20.26■□□□□ 0.83
LTBP4-205ENST00000396819 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
LTBP4-205ENST00000396819 GCC2Q8IWJ2 1684 aa20.26■□□□□ 0.83
LTBP4-205ENST00000396819 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
LTBP4-205ENST00000396819 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
LTBP4-205ENST00000396819 KDM4AO75164 1064 aa20.25■□□□□ 0.83
LTBP4-205ENST00000396819 NUCB2P80303 420 aa20.25■□□□□ 0.83
LTBP4-205ENST00000396819 AIDAQ96BJ3 306 aa20.25■□□□□ 0.83
LTBP4-205ENST00000396819 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
LTBP4-205ENST00000396819 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
LTBP4-205ENST00000396819 FAM98CQ17RN3 349 aaKnown RBP20.24■□□□□ 0.83
LTBP4-205ENST00000396819 ARHGAP45Q92619 1136 aa20.24■□□□□ 0.83
LTBP4-205ENST00000396819 SLC5A1P13866 664 aa20.24■□□□□ 0.83
LTBP4-205ENST00000396819 KRT24Q2M2I5 525 aa20.24■□□□□ 0.83
LTBP4-205ENST00000396819 RABEP1Q15276 862 aa20.24■□□□□ 0.83
LTBP4-205ENST00000396819 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
LTBP4-205ENST00000396819 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
LTBP4-205ENST00000396819 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
LTBP4-205ENST00000396819 TMOD2Q9NZR1 351 aa20.23■□□□□ 0.83
LTBP4-205ENST00000396819 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
LTBP4-205ENST00000396819 BRMS1Q9HCU9 246 aa20.23■□□□□ 0.83
LTBP4-205ENST00000396819 USP21Q9UK80 565 aa20.23■□□□□ 0.83
LTBP4-205ENST00000396819 ZNF622Q969S3 477 aaKnown RBP eCLIP20.22■□□□□ 0.834e-8■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms