RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
USP11-203ENST00000377080 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
USP11-203ENST00000377080 USP6P35125 1406 aa12.46□□□□□ -0.41
USP11-203ENST00000377080 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.41
USP11-203ENST00000377080 USP54Q70EL1 1684 aa12.46□□□□□ -0.41
USP11-203ENST00000377080 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
USP11-203ENST00000377080 RABEP1Q15276 862 aa12.46□□□□□ -0.41
USP11-203ENST00000377080 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.41
USP11-203ENST00000377080 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
USP11-203ENST00000377080 SLIT2O94813 1529 aa12.46□□□□□ -0.42
USP11-203ENST00000377080 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
USP11-203ENST00000377080 KDRP35968 1356 aa12.45□□□□□ -0.42
USP11-203ENST00000377080 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
USP11-203ENST00000377080 R3HDM1Q15032 1099 aaKnown RBP12.45□□□□□ -0.42
USP11-203ENST00000377080 TTC22Q5TAA0 569 aa12.45□□□□□ -0.42
USP11-203ENST00000377080 OSBPL3Q9H4L5 887 aa12.45□□□□□ -0.42
USP11-203ENST00000377080 CRB1P82279 1406 aa12.45□□□□□ -0.42
USP11-203ENST00000377080 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
USP11-203ENST00000377080 NPHP3Q7Z494 1330 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
USP11-203ENST00000377080 HMMRO75330 724 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 ESCO1Q5FWF5 840 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 CASC1Q6TDU7 716 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
USP11-203ENST00000377080 FMN2Q9NZ56 1722 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 PXDNQ92626 1479 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 ATP10DQ9P241 1426 aa12.44□□□□□ -0.42
USP11-203ENST00000377080 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
USP11-203ENST00000377080 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
USP11-203ENST00000377080 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
USP11-203ENST00000377080 CWC22Q9HCG8 908 aaKnown RBP12.43□□□□□ -0.42
USP11-203ENST00000377080 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
USP11-203ENST00000377080 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
USP11-203ENST00000377080 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 ACEP12821 1306 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP11-203ENST00000377080 FBLN1P23142 703 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 NUCB2P80303 420 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
USP11-203ENST00000377080 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 SBNO1A3KN83 1393 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
USP11-203ENST00000377080 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
USP11-203ENST00000377080 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
USP11-203ENST00000377080 CEP85Q6P2H3 762 aa12.41□□□□□ -0.42
USP11-203ENST00000377080 GAS2L2Q8NHY3 880 aa12.41□□□□□ -0.42
USP11-203ENST00000377080 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
USP11-203ENST00000377080 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
USP11-203ENST00000377080 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
USP11-203ENST00000377080 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
USP11-203ENST00000377080 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
USP11-203ENST00000377080 FLT4P35916 1363 aa12.41□□□□□ -0.42
USP11-203ENST00000377080 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
USP11-203ENST00000377080 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.42
USP11-203ENST00000377080 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
USP11-203ENST00000377080 FOXO3O43524 673 aa12.4□□□□□ -0.42
USP11-203ENST00000377080 REC8O95072 547 aa12.4□□□□□ -0.42
USP11-203ENST00000377080 A0A0G2JS52 829 aa12.39□□□□□ -0.43
USP11-203ENST00000377080 FAM83GA6ND36 823 aa12.39□□□□□ -0.43
USP11-203ENST00000377080 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
USP11-203ENST00000377080 ONECUT3O60422 494 aaPredicted RBP12.39□□□□□ -0.43
USP11-203ENST00000377080 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
USP11-203ENST00000377080 VPS72Q15906 364 aa12.39□□□□□ -0.43
USP11-203ENST00000377080 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
USP11-203ENST00000377080 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
USP11-203ENST00000377080 TNS1Q9HBL0 1735 aaKnown RBP12.38□□□□□ -0.43
USP11-203ENST00000377080 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
USP11-203ENST00000377080 MCM2P49736 904 aa12.38□□□□□ -0.43
USP11-203ENST00000377080 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
USP11-203ENST00000377080 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
USP11-203ENST00000377080 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
USP11-203ENST00000377080 SRCIN1Q9C0H9 1055 aa12.37□□□□□ -0.43
USP11-203ENST00000377080 GRPEL1Q9HAV7 217 aa12.37□□□□□ -0.43
USP11-203ENST00000377080 AOX1Q06278 1338 aa12.37□□□□□ -0.43
USP11-203ENST00000377080 ST18O60284 1047 aa12.36□□□□□ -0.43
USP11-203ENST00000377080 CYP2E1P05181 493 aaPredicted RBP12.36□□□□□ -0.43
USP11-203ENST00000377080 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
USP11-203ENST00000377080 GNAI3P08754 354 aa12.36□□□□□ -0.43
USP11-203ENST00000377080 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
USP11-203ENST00000377080 HSP90AB2PQ58FF8 381 aa12.36□□□□□ -0.43
USP11-203ENST00000377080 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
USP11-203ENST00000377080 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
USP11-203ENST00000377080 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 ERC2O15083 957 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 GNAI2P04899 355 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 SDSP20132 328 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 CLCN1P35523 988 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 ANAPC15P60006 121 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 MAP3K19Q56UN5 1328 aa12.35□□□□□ -0.43
USP11-203ENST00000377080 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
USP11-203ENST00000377080 EZH2Q15910 746 aaKnown RBP12.34□□□□□ -0.43
USP11-203ENST00000377080 CCDC30Q5VVM6 783 aa12.34□□□□□ -0.43
USP11-203ENST00000377080 STAP2Q9UGK3 403 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms