RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 PCDH11YQ9BZA8 1340 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.12□□□□□ -1.59
NCOA1-202ENST00000348332 ABCC6O95255 1503 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 TPM3P06753 285 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 NOP2P46087 812 aaKnown RBP5.12□□□□□ -1.59
NCOA1-202ENST00000348332 KRT27Q7Z3Y8 459 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 IFNL2Q8IZJ0 200 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 A0A087WZG4 1122 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 ZCRB1Q8TBF4 217 aaKnown RBP5.12□□□□□ -1.59
NCOA1-202ENST00000348332 NECTIN2Q92692 538 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 GJD4Q96KN9 370 aaPredicted RBP5.12□□□□□ -1.59
NCOA1-202ENST00000348332 TPM2P07951 284 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 BARGINQ6ZT62 677 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 SCLT1Q96NL6 688 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 WDR17Q8IZU2 1322 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 ROBO1Q9Y6N7 1651 aa5.12□□□□□ -1.59
NCOA1-202ENST00000348332 ARHGEF28Q8N1W1 1705 aaKnown RBP5.12□□□□□ -1.59
NCOA1-202ENST00000348332 HTATSF1O43719 755 aaKnown RBP5.11□□□□□ -1.59
NCOA1-202ENST00000348332 NEBLO76041 1014 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 TESK2Q96S53 571 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 ZMYND15Q9H091 742 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 A0A1W2PP64 1363 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 TSR1Q2NL82 804 aaKnown RBP5.11□□□□□ -1.59
NCOA1-202ENST00000348332 NME9Q86XW9 330 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 DRC1Q96MC2 740 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 OVOS2A0A0G2JMS6 1433 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 OVOS2A0A0J9YW53 1432 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 OVOS2Q6IE36 1432 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 STK32BQ9NY57 414 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 CCER2I3L3R5 266 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 FCHSD2O94868 740 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 USP19O94966 1318 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 INSRP06213 1382 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 CABP4P57796 275 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 NEXNQ0ZGT2 675 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 USP32Q8NFA0 1604 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 TMOD3Q9NYL9 352 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 NRXN3Q9Y4C0 1643 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 ZRANB1Q9UGI0 708 aa5.11□□□□□ -1.59
NCOA1-202ENST00000348332 CRB1P82279 1406 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 ARHGEF25Q86VW2 580 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 FNBP4Q8N3X1 1017 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-202ENST00000348332 MATR3P43243 847 aaKnown RBP eCLIP5.1□□□□□ -1.59
NCOA1-202ENST00000348332 B4GALNT3Q6L9W6 998 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 ZNF530Q6P9A1 599 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-202ENST00000348332 KIAA0232Q92628 1395 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 BICDL1Q6ZP65 573 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 PRR36Q9H6K5 1346 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 SLKQ9H2G2 1235 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-202ENST00000348332 PARD3Q8TEW0 1356 aa5.1□□□□□ -1.59
NCOA1-202ENST00000348332 POLD1P28340 1107 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 NFXL1Q6ZNB6 911 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 BCL11BQ9C0K0 894 aaPredicted RBP5.09□□□□□ -1.59
NCOA1-202ENST00000348332 SMC4Q9NTJ3 1288 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 MED1Q15648 1581 aaPredicted RBP5.09□□□□□ -1.59
NCOA1-202ENST00000348332 CPSF1Q10570 1443 aaKnown RBP5.09□□□□□ -1.59
NCOA1-202ENST00000348332 ERICH2A1L162 156 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 STARD3NLO95772 234 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 MTHFSP49914 203 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 CDK12Q9NYV4 1490 aaPredicted RBP5.09□□□□□ -1.59
NCOA1-202ENST00000348332 E9PSI1 815 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 KDM4AO75164 1064 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 HOXC9P31274 260 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 ITPRIPQ8IWB1 547 aa5.09□□□□□ -1.59
NCOA1-202ENST00000348332 DDX54Q8TDD1 881 aaKnown RBP5.09□□□□□ -1.59
NCOA1-202ENST00000348332 UQCRHP07919 91 aa5.09□□□□□ -1.6
NCOA1-202ENST00000348332 CHRNA2Q15822 529 aa5.09□□□□□ -1.6
NCOA1-202ENST00000348332 SEPT12Q8IYM1 358 aa5.09□□□□□ -1.6
NCOA1-202ENST00000348332 CCDC47Q96A33 483 aaKnown RBP5.09□□□□□ -1.6
NCOA1-202ENST00000348332 ZNF652Q9Y2D9 606 aa5.09□□□□□ -1.6
NCOA1-202ENST00000348332 RUNDC1Q96C34 613 aa5.09□□□□□ -1.6
NCOA1-202ENST00000348332 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.6
NCOA1-202ENST00000348332 COL14A1Q05707 1796 aaKnown RBP5.08□□□□□ -1.6
NCOA1-202ENST00000348332 MIER1Q8N108 512 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 BABAM1Q9NWV8 329 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 SOS1Q07889 1333 aaPredicted RBP5.08□□□□□ -1.6
NCOA1-202ENST00000348332 DDX58O95786 925 aaKnown RBP5.08□□□□□ -1.6
NCOA1-202ENST00000348332 TRIM29Q14134 588 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 SART3Q15020 963 aaKnown RBP5.08□□□□□ -1.6
NCOA1-202ENST00000348332 HSCBQ8IWL3 235 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 DCAF5Q96JK2 942 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 PSMD1Q99460 953 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 NALCNQ8IZF0 1738 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 SHPRHQ149N8 1683 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 HSP90AB2PQ58FF8 381 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 GOLGA6L1Q8N7Z2 621 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 H3BQV1 296 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 EPS15P42566 896 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 IFFO2Q5TF58 517 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 CABLES1Q8TDN4 633 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 AIMP1Q12904 312 aaKnown RBP5.08□□□□□ -1.6
NCOA1-202ENST00000348332 MCTP1Q6DN14 999 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 SPATA31A5Q5VU36 1347 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 SPATA31A7Q8IWB4 1347 aa5.08□□□□□ -1.6
NCOA1-202ENST00000348332 GNAT3A8MTJ3 354 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 GNAI1P63096 354 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 FAM98CQ17RN3 349 aaKnown RBP5.07□□□□□ -1.6
NCOA1-202ENST00000348332 NHSL1Q5SYE7 1610 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 ERVV-2B6SEH9 535 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 IPO8O15397 1037 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms