RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CCDC70Q6NSX1 233 aa20.39■□□□□ 0.85
GABRB3-202ENST00000311550 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.39■□□□□ 0.85
GABRB3-202ENST00000311550 RBM27Q9P2N5 1060 aaKnown RBP20.39■□□□□ 0.85
GABRB3-202ENST00000311550 ACEP12821 1306 aa20.39■□□□□ 0.85
GABRB3-202ENST00000311550 SDSP20132 328 aa20.39■□□□□ 0.85
GABRB3-202ENST00000311550 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
GABRB3-202ENST00000311550 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
GABRB3-202ENST00000311550 MRPL50Q8N5N7 158 aaKnown RBP20.38■□□□□ 0.85
GABRB3-202ENST00000311550 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
GABRB3-202ENST00000311550 KRT32Q14532 448 aa20.38■□□□□ 0.85
GABRB3-202ENST00000311550 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
GABRB3-202ENST00000311550 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
GABRB3-202ENST00000311550 MYD88Q99836 296 aa20.38■□□□□ 0.85
GABRB3-202ENST00000311550 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
GABRB3-202ENST00000311550 KCNH5Q8NCM2 988 aa20.37■□□□□ 0.85
GABRB3-202ENST00000311550 ANXA1P04083 346 aa20.37■□□□□ 0.85
GABRB3-202ENST00000311550 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
GABRB3-202ENST00000311550 FILIP1Q7Z7B0 1213 aa20.37■□□□□ 0.85
GABRB3-202ENST00000311550 MAP3K11Q16584 847 aa20.37■□□□□ 0.85
GABRB3-202ENST00000311550 TEX35Q5T0J7 233 aa20.37■□□□□ 0.85
GABRB3-202ENST00000311550 UHRF1BP1Q6BDS2 1440 aa20.37■□□□□ 0.85
GABRB3-202ENST00000311550 A2MP01023 1474 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 SERPINC1P01008 464 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 CFAP45Q9UL16 551 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 PRDM11Q9NQV5 511 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
GABRB3-202ENST00000311550 PPP1R42Q7Z4L9 355 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 CEP89Q96ST8 783 aa20.36■□□□□ 0.85
GABRB3-202ENST00000311550 SHANK2Q9UPX8 1470 aa20.35■□□□□ 0.85
GABRB3-202ENST00000311550 LIMCH1Q9UPQ0 1083 aa20.35■□□□□ 0.85
GABRB3-202ENST00000311550 FOXO3O43524 673 aa20.35■□□□□ 0.85
GABRB3-202ENST00000311550 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
GABRB3-202ENST00000311550 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 LARP1Q6PKG0 1096 aaKnown RBP20.34■□□□□ 0.85
GABRB3-202ENST00000311550 TTC21BQ7Z4L5 1316 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 CCDC183Q5T5S1 534 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 TRIM34Q9BYJ4 488 aa20.34■□□□□ 0.85
GABRB3-202ENST00000311550 PI4KAP2A4QPH2 592 aa20.33■□□□□ 0.85
GABRB3-202ENST00000311550 PI4KAP1Q8N8J0 262 aa20.33■□□□□ 0.85
GABRB3-202ENST00000311550 NUP133Q8WUM0 1156 aa20.33■□□□□ 0.85
GABRB3-202ENST00000311550 USP25Q9UHP3 1055 aa20.33■□□□□ 0.85
GABRB3-202ENST00000311550 CCDC112Q8NEF3 446 aa20.33■□□□□ 0.84
GABRB3-202ENST00000311550 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.84
GABRB3-202ENST00000311550 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
GABRB3-202ENST00000311550 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
GABRB3-202ENST00000311550 NAP1L1P55209 391 aaKnown RBP20.32■□□□□ 0.84
GABRB3-202ENST00000311550 ANKRD44Q8N8A2 993 aa20.32■□□□□ 0.84
GABRB3-202ENST00000311550 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
GABRB3-202ENST00000311550 VAMP4O75379 141 aa20.32■□□□□ 0.84
GABRB3-202ENST00000311550 ZBTB40Q9NUA8 1239 aa20.32■□□□□ 0.84
GABRB3-202ENST00000311550 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
GABRB3-202ENST00000311550 KLHL40Q2TBA0 621 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 CEP57L1Q8IYX8 460 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 MAP3K2Q9Y2U5 619 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 IDH1O75874 414 aaKnown RBP20.31■□□□□ 0.84
GABRB3-202ENST00000311550 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 TMX3Q96JJ7 454 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 FAM177A1Q8N128 213 aaPredicted RBP20.31■□□□□ 0.84
GABRB3-202ENST00000311550 CTNNA3Q9UI47 895 aa20.31■□□□□ 0.84
GABRB3-202ENST00000311550 SH2B1Q9NRF2 756 aaPredicted RBP20.31■□□□□ 0.84
GABRB3-202ENST00000311550 GUCY1B3Q02153 619 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 PDE1AP54750 535 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 CKAP2LQ8IYA6 745 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 ECHDC1Q9NTX5 307 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 SAMD1Q6SPF0 538 aaPredicted RBP20.3■□□□□ 0.84
GABRB3-202ENST00000311550 MPHOSPH8Q99549 860 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
GABRB3-202ENST00000311550 A0A1W2PP64 1363 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 NACAP1Q9BZK3 213 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 GJB2P29033 226 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
GABRB3-202ENST00000311550 TFIP11Q9UBB9 837 aaKnown RBP20.29■□□□□ 0.84
GABRB3-202ENST00000311550 PPIP5K1Q6PFW1 1433 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 ASXL2Q76L83 1435 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 ZSCAN23Q3MJ62 389 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 SMC5Q8IY18 1101 aa20.29■□□□□ 0.84
GABRB3-202ENST00000311550 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
GABRB3-202ENST00000311550 STX6O43752 255 aa20.28■□□□□ 0.84
GABRB3-202ENST00000311550 FILIP1LQ4L180 1135 aa20.27■□□□□ 0.84
GABRB3-202ENST00000311550 IMMTQ16891 758 aaKnown RBP20.27■□□□□ 0.84
GABRB3-202ENST00000311550 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
GABRB3-202ENST00000311550 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
GABRB3-202ENST00000311550 RHPN1Q8TCX5 695 aa20.27■□□□□ 0.84
GABRB3-202ENST00000311550 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.84
GABRB3-202ENST00000311550 ADGRL2O95490 1459 aa20.27■□□□□ 0.84
GABRB3-202ENST00000311550 PIK3R4Q99570 1358 aa20.27■□□□□ 0.83
GABRB3-202ENST00000311550 ZMYM4Q5VZL5 1548 aa20.26■□□□□ 0.83
GABRB3-202ENST00000311550 IFIT1P09914 478 aaKnown RBP20.26■□□□□ 0.83
GABRB3-202ENST00000311550 TDO2P48775 406 aa20.26■□□□□ 0.83
GABRB3-202ENST00000311550 U3KPZ7 1027 aaPredicted RBP20.26■□□□□ 0.83
GABRB3-202ENST00000311550 PPFIA3O75145 1194 aa20.26■□□□□ 0.83
GABRB3-202ENST00000311550 SNX21Q969T3 373 aa20.26■□□□□ 0.83
GABRB3-202ENST00000311550 RRP9O43818 475 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms