RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Elp1Q7TT37 1333 aaKnown RBP29.65■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Hoxa7P02830 229 aa29.65■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Atp8b2P98199 1209 aa29.65■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Amotl2Q8K371 772 aa29.65■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Wdr17E9Q271 1322 aa29.65■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Ppp1r42Q8R1Z4 357 aa29.65■■■□□ 2.34
Ubp1-203ENSMUST00000116492 Mmp8O70138 465 aa29.63■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Fmnl2A2APV2 1086 aa29.63■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Cc2d1aQ8K1A6 943 aa29.63■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Zkscan2G3X952 960 aa29.61■■■□□ 2.33
Ubp1-203ENSMUST00000116492 CoilQ5SU73 570 aa29.61■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Ssh1Q76I79 1042 aa29.61■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Dlg5E9Q9R9 1921 aa29.61■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Eif4a1P60843 406 aaKnown RBP29.59■■■□□ 2.33
Ubp1-203ENSMUST00000116492 4933402E13RikQ9D4D2 429 aa29.59■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Dnajc10Q9DC23 793 aa29.59■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Rnf123Q5XPI3 1314 aa29.59■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Q9D2X8 372 aa29.58■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Bcar3Q9QZK2 820 aa29.58■■■□□ 2.33
Ubp1-203ENSMUST00000116492 Siglec1Q62230 1695 aa29.57■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Tnnt1O88346 262 aa29.57■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Ddit3P35639 168 aa29.57■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Erc2Q6PH08 957 aa29.57■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Mcm4P49717 862 aa29.56■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Mcmdc2E9Q956 681 aa29.55■■■□□ 2.32
Ubp1-203ENSMUST00000116492 PrkcshO08795 521 aa29.55■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Casq1O09165 405 aa29.55■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Dnajc5P60904 198 aa29.55■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Atg3Q9CPX6 314 aa29.55■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Cyp2d11P24457 504 aa29.54■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Cwc27Q3TKY6 469 aa29.54■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Ppp1r37Q8BKR5 712 aa29.54■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Gtf3c3Q3TMP1 882 aa29.53■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Ptpdc1Q6NZK8 747 aa29.53■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Aox2Q5SGK3 1345 aa29.53■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Gli3Q61602 1583 aa29.52■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Echdc1Q9D9V3 322 aa29.51■■■□□ 2.32
Ubp1-203ENSMUST00000116492 Col1a2Q01149 1372 aa29.51■■■□□ 2.31
Ubp1-203ENSMUST00000116492 RestQ8VIG1 1082 aa29.51■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Nrxn3Q6P9K9 1571 aa29.51■■■□□ 2.31
Ubp1-203ENSMUST00000116492 BcorQ8CGN4 1759 aa29.51■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Plcb2A3KGF7 1181 aa29.5■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Btbd11Q6GQW0 1109 aa29.5■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Mrps27Q8BK72 415 aaKnown RBP29.5■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Noc3lQ8VI84 807 aaKnown RBP29.5■■■□□ 2.31
Ubp1-203ENSMUST00000116492 TnrQ8BYI9 1358 aa29.5■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Ier5O89113 308 aa29.45■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Hmox1P14901 289 aa29.45■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Nol8Q3UHX0 1147 aaKnown RBP29.45■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Arhgef1Q61210 920 aaKnown RBP29.45■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Cyp27a1Q9DBG1 533 aa29.45■■■□□ 2.31
Ubp1-203ENSMUST00000116492 Simc1E9Q6E9 1354 aa29.45■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Spryd3E9Q9B3 442 aa29.45■■■□□ 2.3
Ubp1-203ENSMUST00000116492 PsapQ61207 557 aaKnown RBP29.45■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Bend3Q6PAL0 825 aa29.45■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Slain2Q8CI08 581 aa29.44■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Irx6Q9ER75 438 aa29.44■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Kcna6Q61923 529 aa29.43■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Zkscan1Q8BGS3 561 aaKnown RBP29.42■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Wnk3Q80XP9 1757 aa29.42■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Dzip1Q8BMD2 852 aa29.42■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Nol11Q8BJW5 723 aaKnown RBP29.41■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Tmem119Q8R138 280 aa29.41■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Zkscan16A2ALW2 728 aa29.41■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Fkbp4P30416 458 aa29.41■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Nkx2-3P97334 362 aa29.41■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Farp2Q91VS8 1065 aa29.4■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Prune1Q8BIW1 454 aa29.39■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Dmrtc1Q9D9R7 182 aa29.39■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Zap70P43404 618 aa29.39■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Isy1Q69ZQ2 285 aaKnown RBP29.39■■■□□ 2.3
Ubp1-203ENSMUST00000116492 TkfcQ8VC30 578 aa29.39■■■□□ 2.3
Ubp1-203ENSMUST00000116492 Adcy9P51830 1353 aa29.39■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Cct4P80315 539 aaKnown RBP29.38■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Col15a1O35206 1367 aa29.38■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Phlpp1Q8CHE4 1687 aa29.38■■■□□ 2.29
Ubp1-203ENSMUST00000116492 MccE9PWI3 1003 aa29.38■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Pcdh10E9PXQ7 1057 aa29.38■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Exoc6bA6H5Z3 810 aa29.37■■■□□ 2.29
Ubp1-203ENSMUST00000116492 GckrQ91X44 587 aa29.36■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Atp10bB1AWN4 1474 aa29.36■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Cfdp1O88271 295 aaKnown RBP29.36■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Anapc15P60007 132 aa29.36■■■□□ 2.29
Ubp1-203ENSMUST00000116492 CalcaP70160 136 aa29.36■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Stk11ipQ3TAA7 1072 aa29.36■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Tpx2A2APB8 745 aaKnown RBP29.35■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Hsp90b1P08113 802 aaKnown RBP29.35■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Gm10471E9Q1C7 252 aa29.35■■■□□ 2.29
Ubp1-203ENSMUST00000116492 PtmsQ9D0J8 101 aaKnown RBP29.35■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Mphosph10Q810V0 681 aaKnown RBP29.34■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Bag4Q8CI61 457 aa29.34■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Bloc1s4Q8VED2 215 aa29.34■■■□□ 2.29
Ubp1-203ENSMUST00000116492 LlphQ9D945 130 aaKnown RBP29.34■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Flt4P35917 1363 aa29.34■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Tlr7P58681 1050 aa29.33■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Eif3aP23116 1344 aaKnown RBP29.33■■■□□ 2.29
Ubp1-203ENSMUST00000116492 AnlnQ8K298 1121 aaKnown RBP29.33■■■□□ 2.29
Ubp1-203ENSMUST00000116492 Tceal9Q9DD24 104 aa29.32■■■□□ 2.28
Ubp1-203ENSMUST00000116492 Taf7Q9R1C0 341 aa29.32■■■□□ 2.28
Ubp1-203ENSMUST00000116492 MlecQ6ZQI3 291 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms