RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Ccer1Q9CQL2 403 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Ccdc183A2AJB1 534 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 CastP51125 788 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Ccdc34Q3UI66 367 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Col14a1Q80X19 1797 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Gm42641I6L9G2 585 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Birc3O08863 600 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Sema6bO54951 886 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 AtripQ8BMG1 785 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Cps1Q8C196 1500 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Ipo7Q9EPL8 1038 aaKnown RBP8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Ranbp1P34022 203 aaKnown RBP8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Sycp1Q62209 993 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 TxlnbQ8VBT1 685 aa8.59□□□□□ -1.03
Chm-202ENSMUST00000113388 Zcwpw1Q6IR42 630 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Nwd1A6H603 1563 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Kif16bB1AVY7 1312 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Ccdc146E9Q9F7 977 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Mnat1P51949 309 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Frmd3Q8BHD4 595 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Rps6ka5Q8C050 863 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Pank3Q8R2W9 370 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Cabp4Q8VHC5 271 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Bcl2l12Q9D3J3 255 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Txnrd1Q9JMH6 613 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Col18a1P39061 1774 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Map3k19E9Q3S4 1311 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Plekhg1F6S200 1446 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Glipr1l2Q9CQ35 332 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 Inpp5dQ9ES52 1191 aa8.58□□□□□ -1.04
Chm-202ENSMUST00000113388 MvpQ9EQK5 861 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Kif7B7ZNG0 1348 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Wdr17E9Q271 1322 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 NalcnQ8BXR5 1738 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Zfp651E9PZ11 729 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Ftsj3Q9DBE9 838 aaKnown RBP8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Sptbn5F6UCX4 1208 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Nf2P46662 596 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Ppp1r9bQ6R891 817 aaKnown RBP8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Znf653Q6YND2 615 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 MypopQ8R4U1 393 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Dcaf11Q91VU6 549 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Ybx3Q9JKB3 361 aaKnown RBP8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 SufuQ9Z0P7 484 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Tmem2Q5FWI3 1383 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Abca14E9Q8F8 1683 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Lmtk3Q5XJV6 1424 aa8.57□□□□□ -1.04
Chm-202ENSMUST00000113388 Fam43bA2AM80 330 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Kif4P33174 1231 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Erbb4Q61527 1308 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Rsph10bE9PYQ0 876 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Dzip1Q8BMD2 852 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Idi2Q8BFZ6 227 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Apbb1ipQ8R5A3 670 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Atp2b3Q0VF55 1220 aa8.56□□□□□ -1.04
Chm-202ENSMUST00000113388 Fam107bQ3TGF2 131 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Psrc1Q9D0P7 329 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Frmpd2A0A140LI67 1392 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Ift57Q8BXG3 429 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Cgref1Q8R1U2 281 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Cep83Q9D5R3 692 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Nckap5lQ6GQX2 1323 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 KdrP35918 1367 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Usp32F8VPZ3 1604 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Gm21698A0A087WQP8 267 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Gm21671G3UY31 267 aa8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Rai14Q9EP71 979 aaKnown RBP8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 Utp3Q9JI13 469 aaKnown RBP8.55□□□□□ -1.04
Chm-202ENSMUST00000113388 NinlQ6ZQ12 1394 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Esx1O88933 382 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 U2surpQ6NV83 1029 aaKnown RBP8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Mical1Q8VDP3 1048 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Sipa1l2Q80TE4 1722 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Rcan3Q9JKK0 239 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Fam184bQ0KK56 942 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Saal1Q9D2C2 474 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Styxl1Q9DAR2 321 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Golga5Q9QYE6 729 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Arap3Q8R5G7 1538 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Itsn2Q9Z0R6 1659 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Kif20bQ80WE4 1774 aaKnown RBP8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 A0A1L1SQF0 893 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Mkrn3Q60764 544 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Mns1Q61884 491 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Dennd6aQ8BH65 605 aa8.54□□□□□ -1.04
Chm-202ENSMUST00000113388 Traf1P39428 409 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Tshz1Q5DTH5 1084 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Fmnl3Q6ZPF4 1028 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Spag5Q7TME2 1165 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Cc2d1bQ8BRN9 848 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Olfml1Q8BSH2 233 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Irx4Q9QY61 515 aa8.53□□□□□ -1.04
Chm-202ENSMUST00000113388 Mcm5P49718 733 aa8.52□□□□□ -1.04
Chm-202ENSMUST00000113388 Irx1P81068 480 aa8.52□□□□□ -1.04
Chm-202ENSMUST00000113388 Pank2Q3U4S0 443 aa8.52□□□□□ -1.04
Chm-202ENSMUST00000113388 Sf3b2Q3UJB0 878 aaKnown RBP8.52□□□□□ -1.04
Chm-202ENSMUST00000113388 Q8VDP2 222 aa8.52□□□□□ -1.04
Chm-202ENSMUST00000113388 MaddQ80U28 1577 aa8.52□□□□□ -1.04
Chm-202ENSMUST00000113388 PaskQ8CEE6 1383 aa8.52□□□□□ -1.05
Chm-202ENSMUST00000113388 Ccdc112A0AUP1 442 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms