Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Gm25239-201ENSMUST00000174915 86 ntBASIC39.94■■■■□ 3.98
Cc2d1bQ8BRN9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
Cc2d1bQ8BRN9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Cc2d1bQ8BRN9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
Cc2d1bQ8BRN9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.45■■■■□ 3.43
Cc2d1bQ8BRN9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Cc2d1bQ8BRN9 Gm15042-201ENSMUST00000120212 883 ntBASIC35.53■■■■□ 3.28
Cc2d1bQ8BRN9 Psd-208ENSMUST00000224556 2034 ntBASIC35.1■■■■□ 3.21
Cc2d1bQ8BRN9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Cc2d1bQ8BRN9 Gm15045-201ENSMUST00000117359 883 ntBASIC34.85■■■■□ 3.17
Cc2d1bQ8BRN9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cc2d1bQ8BRN9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.33■■■■□ 3.09
Cc2d1bQ8BRN9 Gm24109-201ENSMUST00000175489 103 ntBASIC34.32■■■■□ 3.08
Cc2d1bQ8BRN9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Cc2d1bQ8BRN9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Cc2d1bQ8BRN9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Cc2d1bQ8BRN9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Cc2d1bQ8BRN9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Cc2d1bQ8BRN9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
Cc2d1bQ8BRN9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Cc2d1bQ8BRN9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cc2d1bQ8BRN9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cc2d1bQ8BRN9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Cc2d1bQ8BRN9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.96
Cc2d1bQ8BRN9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.48■■■□□ 2.95
Cc2d1bQ8BRN9 Gm23366-201ENSMUST00000175022 89 ntBASIC33.44■■■□□ 2.94
Cc2d1bQ8BRN9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cc2d1bQ8BRN9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.38■■■□□ 2.93
Cc2d1bQ8BRN9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Cc2d1bQ8BRN9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cc2d1bQ8BRN9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Cc2d1bQ8BRN9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Cc2d1bQ8BRN9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Cc2d1bQ8BRN9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Cc2d1bQ8BRN9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.06■■■□□ 2.88
Cc2d1bQ8BRN9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Cc2d1bQ8BRN9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Cc2d1bQ8BRN9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
Cc2d1bQ8BRN9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Cc2d1bQ8BRN9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cc2d1bQ8BRN9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.63■■■□□ 2.81
Cc2d1bQ8BRN9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.45■■■□□ 2.79
Cc2d1bQ8BRN9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Cc2d1bQ8BRN9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.28■■■□□ 2.76
Cc2d1bQ8BRN9 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.2■■■□□ 2.74
Cc2d1bQ8BRN9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Cc2d1bQ8BRN9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Cc2d1bQ8BRN9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cc2d1bQ8BRN9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
Cc2d1bQ8BRN9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Cc2d1bQ8BRN9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cc2d1bQ8BRN9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.72■■■□□ 2.67
Cc2d1bQ8BRN9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cc2d1bQ8BRN9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cc2d1bQ8BRN9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cc2d1bQ8BRN9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.53■■■□□ 2.64
Cc2d1bQ8BRN9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cc2d1bQ8BRN9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cc2d1bQ8BRN9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cc2d1bQ8BRN9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cc2d1bQ8BRN9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cc2d1bQ8BRN9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cc2d1bQ8BRN9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.38■■■□□ 2.61
Cc2d1bQ8BRN9 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.37■■■□□ 2.61
Cc2d1bQ8BRN9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.37■■■□□ 2.61
Cc2d1bQ8BRN9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Cc2d1bQ8BRN9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Cc2d1bQ8BRN9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
Cc2d1bQ8BRN9 Gm25238-201ENSMUST00000174914 89 ntBASIC31.31■■■□□ 2.6
Cc2d1bQ8BRN9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.26■■■□□ 2.59
Cc2d1bQ8BRN9 Gm27325-201ENSMUST00000175467 74 ntBASIC31.25■■■□□ 2.59
Cc2d1bQ8BRN9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cc2d1bQ8BRN9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.21■■■□□ 2.59
Cc2d1bQ8BRN9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cc2d1bQ8BRN9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cc2d1bQ8BRN9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Cc2d1bQ8BRN9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.99■■■□□ 2.55
Cc2d1bQ8BRN9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Cc2d1bQ8BRN9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Cc2d1bQ8BRN9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cc2d1bQ8BRN9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Cc2d1bQ8BRN9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cc2d1bQ8BRN9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cc2d1bQ8BRN9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cc2d1bQ8BRN9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cc2d1bQ8BRN9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cc2d1bQ8BRN9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cc2d1bQ8BRN9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
Cc2d1bQ8BRN9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cc2d1bQ8BRN9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Cc2d1bQ8BRN9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cc2d1bQ8BRN9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cc2d1bQ8BRN9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.59■■■□□ 2.49
Cc2d1bQ8BRN9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cc2d1bQ8BRN9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cc2d1bQ8BRN9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Cc2d1bQ8BRN9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.53■■■□□ 2.48
Cc2d1bQ8BRN9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cc2d1bQ8BRN9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.46■■■□□ 2.47
Cc2d1bQ8BRN9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.45■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms