RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Ppip5k2Q6ZQB6 1129 aa19.22■□□□□ 0.67
Vcan-201ENSMUST00000109543 Nucb1Q02819 459 aaKnown RBP19.22■□□□□ 0.67
Vcan-201ENSMUST00000109543 Atp8b2P98199 1209 aa19.21■□□□□ 0.67
Vcan-201ENSMUST00000109543 Arhgef1Q61210 920 aaKnown RBP19.21■□□□□ 0.67
Vcan-201ENSMUST00000109543 Ppp1r37Q8BKR5 712 aa19.21■□□□□ 0.67
Vcan-201ENSMUST00000109543 Bcar3Q9QZK2 820 aa19.21■□□□□ 0.67
Vcan-201ENSMUST00000109543 Nid2O88322 1403 aa19.21■□□□□ 0.67
Vcan-201ENSMUST00000109543 Stk36Q69ZM6 1316 aa19.21■□□□□ 0.67
Vcan-201ENSMUST00000109543 Evi5lH3BKQ3 813 aa19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 ScaperF8VQ70 1398 aaKnown RBP19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 Abcc12Q80WJ6 1366 aa19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 Cnksr1A2A9K7 700 aa19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 Nkx2-3P97334 362 aa19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 CoilQ5SU73 570 aa19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 Nrxn3Q6P9K9 1571 aa19.2■□□□□ 0.66
Vcan-201ENSMUST00000109543 Mmp8O70138 465 aa19.19■□□□□ 0.66
Vcan-201ENSMUST00000109543 Cwc27Q3TKY6 469 aa19.19■□□□□ 0.66
Vcan-201ENSMUST00000109543 Dzip1Q8BMD2 852 aa19.19■□□□□ 0.66
Vcan-201ENSMUST00000109543 Btbd11Q6GQW0 1109 aa19.19■□□□□ 0.66
Vcan-201ENSMUST00000109543 Q9D2X8 372 aa19.19■□□□□ 0.66
Vcan-201ENSMUST00000109543 Alpk3Q924C5 1678 aa19.19■□□□□ 0.66
Vcan-201ENSMUST00000109543 Aox2Q5SGK3 1345 aa19.18■□□□□ 0.66
Vcan-201ENSMUST00000109543 Dlg5E9Q9R9 1921 aa19.18■□□□□ 0.66
Vcan-201ENSMUST00000109543 Siglec1Q62230 1695 aa19.18■□□□□ 0.66
Vcan-201ENSMUST00000109543 TnrQ8BYI9 1358 aa19.18■□□□□ 0.66
Vcan-201ENSMUST00000109543 Kdm4cQ8VCD7 1054 aa19.18■□□□□ 0.66
Vcan-201ENSMUST00000109543 Fkbp4P30416 458 aa19.17■□□□□ 0.66
Vcan-201ENSMUST00000109543 1700010I14RikQ7TPG0 532 aa19.17■□□□□ 0.66
Vcan-201ENSMUST00000109543 EngaseQ8BX80 734 aa19.17■□□□□ 0.66
Vcan-201ENSMUST00000109543 Farp2Q91VS8 1065 aa19.17■□□□□ 0.66
Vcan-201ENSMUST00000109543 GnpatP98192 678 aa19.17■□□□□ 0.66
Vcan-201ENSMUST00000109543 Col1a2Q01149 1372 aa19.16■□□□□ 0.66
Vcan-201ENSMUST00000109543 CalcaP70160 136 aa19.16■□□□□ 0.66
Vcan-201ENSMUST00000109543 Gm10471E9Q1C7 252 aa19.15■□□□□ 0.66
Vcan-201ENSMUST00000109543 Zkscan2G3X952 960 aa19.15■□□□□ 0.66
Vcan-201ENSMUST00000109543 Rsph3aQ3UFY4 516 aa19.14■□□□□ 0.66
Vcan-201ENSMUST00000109543 Kcna6Q61923 529 aa19.14■□□□□ 0.66
Vcan-201ENSMUST00000109543 Ptpdc1Q6NZK8 747 aa19.14■□□□□ 0.66
Vcan-201ENSMUST00000109543 Hmox1P14901 289 aa19.14■□□□□ 0.65
Vcan-201ENSMUST00000109543 Gli3Q61602 1583 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Mcmdc2E9Q956 681 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Stk11ipQ3TAA7 1072 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Exoc6bA6H5Z3 810 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Spryd3E9Q9B3 442 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Bcl2l13P59017 434 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Ssh1Q76I79 1042 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Nol11Q8BJW5 723 aaKnown RBP19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 RestQ8VIG1 1082 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Echdc1Q9D9V3 322 aa19.13■□□□□ 0.65
Vcan-201ENSMUST00000109543 Col15a1O35206 1367 aa19.12■□□□□ 0.65
Vcan-201ENSMUST00000109543 Elp1Q7TT37 1333 aaKnown RBP19.12■□□□□ 0.65
Vcan-201ENSMUST00000109543 Zap70P43404 618 aa19.12■□□□□ 0.65
Vcan-201ENSMUST00000109543 Erc2Q6PH08 957 aa19.12■□□□□ 0.65
Vcan-201ENSMUST00000109543 Phlpp1Q8CHE4 1687 aa19.12■□□□□ 0.65
Vcan-201ENSMUST00000109543 Dixdc1Q80Y83 711 aa19.12■□□□□ 0.65
Vcan-201ENSMUST00000109543 Ddx17Q501J6 650 aaKnown RBP19.11■□□□□ 0.65
Vcan-201ENSMUST00000109543 Bend3Q6PAL0 825 aa19.11■□□□□ 0.65
Vcan-201ENSMUST00000109543 Prune1Q8BIW1 454 aa19.11■□□□□ 0.65
Vcan-201ENSMUST00000109543 Dmrtc1Q9D9R7 182 aa19.11■□□□□ 0.65
Vcan-201ENSMUST00000109543 Simc1E9Q6E9 1354 aa19.1■□□□□ 0.65
Vcan-201ENSMUST00000109543 Ier5O89113 308 aa19.1■□□□□ 0.65
Vcan-201ENSMUST00000109543 Ccdc155Q80VJ8 648 aa19.1■□□□□ 0.65
Vcan-201ENSMUST00000109543 Plcb2A3KGF7 1181 aa19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 Tlr7P58681 1050 aa19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 Atg3Q9CPX6 314 aa19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 Ddit3P35639 168 aa19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 Mphosph10Q810V0 681 aaKnown RBP19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 TkfcQ8VC30 578 aa19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 Adcy9P51830 1353 aa19.09■□□□□ 0.65
Vcan-201ENSMUST00000109543 Gm21698A0A087WQP8 267 aa19.08■□□□□ 0.65
Vcan-201ENSMUST00000109543 Gm21671G3UY31 267 aa19.08■□□□□ 0.65
Vcan-201ENSMUST00000109543 Cfdp1O88271 295 aaKnown RBP19.08■□□□□ 0.65
Vcan-201ENSMUST00000109543 OptnQ8K3K8 584 aa19.08■□□□□ 0.65
Vcan-201ENSMUST00000109543 GckrQ91X44 587 aa19.08■□□□□ 0.65
Vcan-201ENSMUST00000109543 Irx3P81067 507 aa19.08■□□□□ 0.64
Vcan-201ENSMUST00000109543 Map3k13Q1HKZ5 959 aa19.08■□□□□ 0.64
Vcan-201ENSMUST00000109543 PsapQ61207 557 aaKnown RBP19.08■□□□□ 0.64
Vcan-201ENSMUST00000109543 Casq1O09165 405 aa19.07■□□□□ 0.64
Vcan-201ENSMUST00000109543 Slc4a10Q5DTL9 1118 aa19.07■□□□□ 0.64
Vcan-201ENSMUST00000109543 Wnk3Q80XP9 1757 aa19.07■□□□□ 0.64
Vcan-201ENSMUST00000109543 Atf3Q60765 181 aa19.07■□□□□ 0.64
Vcan-201ENSMUST00000109543 Pdzd9Q9D9M4 266 aa19.07■□□□□ 0.64
Vcan-201ENSMUST00000109543 BcorQ8CGN4 1759 aa19.07■□□□□ 0.64
Vcan-201ENSMUST00000109543 CrklP47941 303 aa19.06■□□□□ 0.64
Vcan-201ENSMUST00000109543 Tpx2A2APB8 745 aaKnown RBP19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 Hsp90b1P08113 802 aaKnown RBP19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 Mcm4P49717 862 aa19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 Map3k2Q61083 619 aa19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 ThemisQ8BGW0 636 aa19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 Tmem119Q8R138 280 aa19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 Atp10bB1AWN4 1474 aa19.05■□□□□ 0.64
Vcan-201ENSMUST00000109543 Zkscan16A2ALW2 728 aa19.04■□□□□ 0.64
Vcan-201ENSMUST00000109543 Cyp27a1Q9DBG1 533 aa19.03■□□□□ 0.64
Vcan-201ENSMUST00000109543 SympkQ80X82 1284 aa19.03■□□□□ 0.64
Vcan-201ENSMUST00000109543 Mrps27Q8BK72 415 aaKnown RBP19.03■□□□□ 0.64
Vcan-201ENSMUST00000109543 Rnf123Q5XPI3 1314 aa19.03■□□□□ 0.64
Vcan-201ENSMUST00000109543 Col18a1P39061 1774 aa19.03■□□□□ 0.64
Vcan-201ENSMUST00000109543 Zranb3Q6NZP1 1069 aa19.02■□□□□ 0.64
Vcan-201ENSMUST00000109543 Taf7Q9R1C0 341 aa19.02■□□□□ 0.64
Vcan-201ENSMUST00000109543 Flt4P35917 1363 aa19.02■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms