RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Col18a1P39061 1774 aa10.19□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Prex1Q69ZK0 1650 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Adgrb3Q80ZF8 1522 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Lmtk2Q3TYD6 1471 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Apex1P28352 317 aaKnown RBP10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Kif3bQ61771 747 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Fbxo45Q8K3B1 286 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Mtfr1Q99MB2 328 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Tll2Q9WVM6 1012 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Aebp2Q9Z248 504 aaKnown RBP10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 PtprvP70289 1705 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 ShprhQ7TPQ3 1674 aa10.18□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Aldh1a1P24549 501 aa10.17□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Tmem134Q8R0J4 195 aa10.17□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 3425401B19RikD3Z1D3 1412 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Ccer2J3QPU5 274 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Pik3r2O08908 722 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Msx1P13297 303 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 KhsrpQ3U0V1 748 aaKnown RBP10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Emilin2Q8K482 1074 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Hps4Q99KG7 671 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Fam212aQ9CX62 282 aa10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Usp54Q8BL06 1588 aaKnown RBP10.16□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Arid4bA2CG63 1314 aaKnown RBP10.15□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Cfap70D3YVL2 1141 aa10.15□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Kif13aQ9EQW7 1749 aa10.15□□□□□ -0.78
Ccdc47-202ENSMUST00000106865 Arap3Q8R5G7 1538 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Cdk11bP24788 784 aaKnown RBP10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Fhod1Q6P9Q4 1197 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Pcdhb7Q8CDY9 829 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Lgr5Q9Z1P4 907 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Siglec1Q62230 1695 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Akap12Q9WTQ5 1684 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Cntnap1O54991 1385 aa10.14□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Itsn1Q9Z0R4 1714 aa10.13□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Qtrt2B8ZXI1 415 aa10.13□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Pou3f3P31361 497 aa10.13□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 SympkQ80X82 1284 aa10.13□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Lrch3Q8BVU0 778 aa10.13□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Wdr66E9Q743 1299 aa10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Nek10Q3UGM2 1111 aa10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Brinp3Q499E0 766 aa10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Fzd6Q61089 709 aa10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Cln3Q61124 438 aa10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Mecp2Q9Z2D6 484 aaKnown RBP10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Naip1Q9QWK5 1403 aa10.12□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Col22a1E9Q7P1 1613 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Duxf3A0A0N4SV92 674 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Sema6bO54951 886 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Nop58Q6DFW4 536 aaKnown RBP10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Gimap5Q8BWF2 308 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Znf467Q8JZL0 594 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Pcdhgc3Q91XX1 934 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Lrp6O88572 1613 aa10.11□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Nwd1A6H603 1563 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Lmtk3Q5XJV6 1424 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Epb42P49222 691 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 MafbP54841 323 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Usp48Q3V0C5 1052 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 IrgqQ8VIM9 583 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Nsfl1cQ9CZ44 370 aaKnown RBP10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Fam174aQ9D3L0 190 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Myo3aQ8K3H5 1613 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Adgrl2Q8JZZ7 1487 aa10.1□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Wnt7aP24383 349 aa10.09□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 LmnaP48678 665 aaKnown RBP10.09□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Dusp4Q8BFV3 398 aa10.09□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Rrp7aQ9D1C9 280 aaKnown RBP10.09□□□□□ -0.79
Ccdc47-202ENSMUST00000106865 Tbc1d2bQ3U0J8 965 aa10.08□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Gpsm3Q3U1Z5 159 aa10.08□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Kirrel2Q7TSU7 700 aa10.08□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Map4k5Q8BPM2 847 aaKnown RBP10.08□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Mxra7Q9CZH7 178 aa10.08□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Chic2Q9D9G3 165 aa10.08□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Lamc1P02468 1607 aaKnown RBP10.07□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Ehbp1l1Q99MS7 1716 aa10.07□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Kiaa0391Q8JZY4 584 aaKnown RBP10.07□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Zfp142G5E869 1843 aa10.06□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 JundP15066 341 aa10.06□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Spryd7Q3TFQ1 196 aa10.06□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Kctd15Q8K0E1 283 aa10.06□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Tcf25Q8R3L2 676 aaKnown RBP10.06□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Gatad2bQ8VHR5 594 aaKnown RBP10.06□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Prdm2A2A7B5 1709 aaKnown RBP10.05□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Lrp8Q924X6 996 aa10.05□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Rgs17Q9QZB0 210 aa10.05□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Vps8Q0P5W1 1427 aa10.05□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Spag9Q58A65 1321 aaKnown RBP10.05□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Mia2Q91ZV0 1396 aa10.04□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 KitP05532 979 aa10.04□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Ints6lQ8BND4 861 aa10.04□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Zfp362B1ASA5 418 aa10.03□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Ankrd36D3Z4K0 1415 aa10.03□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Tmem131lQ3U3D7 1597 aa10.03□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Robo1O89026 1612 aa10.03□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Kif1bQ60575 1816 aaKnown RBP10.03□□□□□ -0.8
Ccdc47-202ENSMUST00000106865 Fhad1A6PWD2 1420 aa10.02□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Aplp2Q06335 707 aa10.02□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Desi1Q9CQT7 168 aa10.02□□□□□ -0.81
Ccdc47-202ENSMUST00000106865 Ssh2Q5SW75 1423 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms