Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Gm25239-201ENSMUST00000174915 86 ntBASIC43.22■■■■■ 4.51
Aldh1a1P24549 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.13■■■■■ 4.01
Aldh1a1P24549 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Aldh1a1P24549 Gm24109-201ENSMUST00000175489 103 ntBASIC37.63■■■■□ 3.61
Aldh1a1P24549 Gm15042-201ENSMUST00000120212 883 ntBASIC37.42■■■■□ 3.58
Aldh1a1P24549 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
Aldh1a1P24549 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Aldh1a1P24549 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Aldh1a1P24549 Gm15045-201ENSMUST00000117359 883 ntBASIC36.45■■■■□ 3.43
Aldh1a1P24549 Gm23366-201ENSMUST00000175022 89 ntBASIC36.13■■■■□ 3.37
Aldh1a1P24549 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Aldh1a1P24549 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.22■■■■□ 3.23
Aldh1a1P24549 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Aldh1a1P24549 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.96■■■■□ 3.19
Aldh1a1P24549 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.84■■■■□ 3.17
Aldh1a1P24549 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Aldh1a1P24549 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
Aldh1a1P24549 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Aldh1a1P24549 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Aldh1a1P24549 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Aldh1a1P24549 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.38■■■■□ 3.09
Aldh1a1P24549 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Aldh1a1P24549 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Aldh1a1P24549 Gm25238-201ENSMUST00000174914 89 ntBASIC34.2■■■■□ 3.07
Aldh1a1P24549 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.02
Aldh1a1P24549 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Aldh1a1P24549 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
Aldh1a1P24549 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.65■■■□□ 2.98
Aldh1a1P24549 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Aldh1a1P24549 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.56■■■□□ 2.96
Aldh1a1P24549 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Aldh1a1P24549 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
Aldh1a1P24549 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Aldh1a1P24549 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.27■■■□□ 2.92
Aldh1a1P24549 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.23■■■□□ 2.91
Aldh1a1P24549 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.19■■■□□ 2.9
Aldh1a1P24549 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Aldh1a1P24549 Gm25262-201ENSMUST00000174934 133 ntBASIC33.09■■■□□ 2.89
Aldh1a1P24549 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Aldh1a1P24549 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.04■■■□□ 2.88
Aldh1a1P24549 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.87■■■□□ 2.85
Aldh1a1P24549 Gm27325-201ENSMUST00000175467 74 ntBASIC32.72■■■□□ 2.83
Aldh1a1P24549 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Aldh1a1P24549 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.66■■■□□ 2.82
Aldh1a1P24549 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Aldh1a1P24549 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.5■■■□□ 2.79
Aldh1a1P24549 Gm26115-201ENSMUST00000175605 87 ntBASIC32.43■■■□□ 2.78
Aldh1a1P24549 Rab21-202ENSMUST00000218831 843 ntBASIC32.43■■■□□ 2.78
Aldh1a1P24549 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.39■■■□□ 2.78
Aldh1a1P24549 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Aldh1a1P24549 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Aldh1a1P24549 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Aldh1a1P24549 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
Aldh1a1P24549 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.28■■■□□ 2.76
Aldh1a1P24549 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.27■■■□□ 2.76
Aldh1a1P24549 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Aldh1a1P24549 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Aldh1a1P24549 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Aldh1a1P24549 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Aldh1a1P24549 Gm8109-201ENSMUST00000194076 746 ntBASIC32.1■■■□□ 2.73
Aldh1a1P24549 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Aldh1a1P24549 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.97■■■□□ 2.71
Aldh1a1P24549 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Aldh1a1P24549 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.83■■■□□ 2.69
Aldh1a1P24549 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.78■■■□□ 2.68
Aldh1a1P24549 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.73■■■□□ 2.67
Aldh1a1P24549 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Aldh1a1P24549 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Aldh1a1P24549 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Aldh1a1P24549 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Aldh1a1P24549 Psd-208ENSMUST00000224556 2034 ntBASIC31.64■■■□□ 2.66
Aldh1a1P24549 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.59■■■□□ 2.65
Aldh1a1P24549 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Aldh1a1P24549 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Aldh1a1P24549 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Aldh1a1P24549 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Aldh1a1P24549 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Aldh1a1P24549 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.36■■■□□ 2.61
Aldh1a1P24549 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
Aldh1a1P24549 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.3■■■□□ 2.6
Aldh1a1P24549 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.29■■■□□ 2.6
Aldh1a1P24549 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Aldh1a1P24549 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Aldh1a1P24549 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.19■■■□□ 2.58
Aldh1a1P24549 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.14■■■□□ 2.58
Aldh1a1P24549 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Aldh1a1P24549 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.57
Aldh1a1P24549 Gm27322-201ENSMUST00000184007 104 ntBASIC31.06■■■□□ 2.56
Aldh1a1P24549 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Aldh1a1P24549 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Aldh1a1P24549 Gm24804-201ENSMUST00000174982 85 ntBASIC31.05■■■□□ 2.56
Aldh1a1P24549 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Aldh1a1P24549 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Aldh1a1P24549 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31■■■□□ 2.55
Aldh1a1P24549 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Aldh1a1P24549 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Aldh1a1P24549 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.85■■■□□ 2.53
Aldh1a1P24549 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Aldh1a1P24549 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Aldh1a1P24549 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms