RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Chmp4bQ9D8B3 224 aaKnown RBP10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 NgefQ8CHT1 710 aa10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 Dmrtc1Q9D9R7 182 aa10.11□□□□□ -0.79
Syne1-202ENSMUST00000095899 Sox12Q04890 314 aa10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Gcc1Q9D4H2 778 aa10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 KnstrnQ9D9Z1 312 aaKnown RBP10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Nek4Q9Z1J2 792 aa10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Nucb1Q02819 459 aaKnown RBP10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Smarca5Q91ZW3 1051 aaKnown RBP10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Atp10bB1AWN4 1474 aa10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Gm21190A0A0G2JGJ6 266 aa10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Triml2E9PW10 424 aa10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Pdia3P27773 505 aaKnown RBP10.1□□□□□ -0.79
Syne1-202ENSMUST00000095899 Aox2Q5SGK3 1345 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Zfp142G5E869 1843 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Kdm6aO70546 1401 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Kif20aP97329 887 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Ppp1r37Q8BKR5 712 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Cabp4Q8VHC5 271 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 Ap3b2Q9JME5 1082 aa10.09□□□□□ -0.79
Syne1-202ENSMUST00000095899 4933402E13RikQ9D4D2 429 aa10.08□□□□□ -0.8
Syne1-202ENSMUST00000095899 Abcc12Q80WJ6 1366 aa10.08□□□□□ -0.8
Syne1-202ENSMUST00000095899 Fyb1O35601 819 aa10.08□□□□□ -0.8
Syne1-202ENSMUST00000095899 Phf14Q9D4H9 881 aa10.08□□□□□ -0.8
Syne1-202ENSMUST00000095899 Cgnl1Q6AW69 1298 aa10.08□□□□□ -0.8
Syne1-202ENSMUST00000095899 Stk36Q69ZM6 1316 aa10.08□□□□□ -0.8
Syne1-202ENSMUST00000095899 Pibf1E9Q6K3 756 aa10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 CoilQ5SU73 570 aa10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 Eif4g2Q62448 906 aaKnown RBP10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 Mmp8O70138 465 aa10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 Mcm2P97310 904 aa10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 Sv2bQ8BG39 683 aa10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 Brinp3Q499E0 766 aa10.07□□□□□ -0.8
Syne1-202ENSMUST00000095899 Arhgef1Q61210 920 aaKnown RBP10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Kcna4Q61423 654 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Col15a1O35206 1367 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Adcy9P51830 1353 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Cnksr1A2A9K7 700 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Eif4a1P60843 406 aaKnown RBP10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Nol8Q3UHX0 1147 aaKnown RBP10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Amotl2Q8K371 772 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Amotl1Q9D4H4 968 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Ddx60E9PZQ1 1711 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Wdr17E9Q271 1322 aa10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Elp1Q7TT37 1333 aaKnown RBP10.06□□□□□ -0.8
Syne1-202ENSMUST00000095899 Chpf2Q3UU43 768 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Htatsf1Q8BGC0 757 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Bcl9lQ67FY2 1494 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Tns2Q8CGB6 1400 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 HypkQ9CR41 129 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Shank3Q4ACU6 1730 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 1700019A02RikA0A087WPV9 146 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Ccdc146E9Q9F7 977 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Atp8b2P98199 1209 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Kcna6Q61923 529 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Ppip5k2Q6ZQB6 1129 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Col1a2Q01149 1372 aa10.05□□□□□ -0.8
Syne1-202ENSMUST00000095899 Evi5lH3BKQ3 813 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Arid3aQ62431 601 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Prune1Q8BIW1 454 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 HnrnpuQ8VEK3 800 aaKnown RBP10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Col4a1P02463 1669 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Col22a1E9Q7P1 1613 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 TnrQ8BYI9 1358 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Ssh1Q76I79 1042 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Bcar3Q9QZK2 820 aa10.04□□□□□ -0.8
Syne1-202ENSMUST00000095899 Rtf1A2AQ19 715 aaKnown RBP10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Mcm4P49717 862 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Znf692Q3U381 531 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 ScaperF8VQ70 1398 aaKnown RBP10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 CalcaP70160 136 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Ppp1r42Q8R1Z4 357 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 RestQ8VIG1 1082 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Zdhhc9P59268 364 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Bend3Q6PAL0 825 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Taok2Q6ZQ29 1240 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Dnajc10Q9DC23 793 aa10.03□□□□□ -0.8
Syne1-202ENSMUST00000095899 Gnai2P08752 355 aaKnown RBP10.02□□□□□ -0.81
Syne1-202ENSMUST00000095899 Cyp27a1Q9DBG1 533 aa10.02□□□□□ -0.81
Syne1-202ENSMUST00000095899 Simc1E9Q6E9 1354 aa10.02□□□□□ -0.81
Syne1-202ENSMUST00000095899 Flt4P35917 1363 aa10.02□□□□□ -0.81
Syne1-202ENSMUST00000095899 Rfx1P48377 963 aa10.02□□□□□ -0.81
Syne1-202ENSMUST00000095899 Ank1Q02357 1862 aa10.02□□□□□ -0.81
Syne1-202ENSMUST00000095899 Pdia6Q922R8 440 aaKnown RBP10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Kiaa0232Q80U59 1396 aaKnown RBP10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Mcmdc2E9Q956 681 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Tlr7P58681 1050 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Srgap3Q812A2 1099 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Cyp46a1Q9WVK8 500 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Zkscan16A2ALW2 728 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 1700010I14RikQ7TPG0 532 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 GorabQ8BRM2 368 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Atg3Q9CPX6 314 aa10.01□□□□□ -0.81
Syne1-202ENSMUST00000095899 Igfbp6P47880 238 aa10□□□□□ -0.81
Syne1-202ENSMUST00000095899 Atf3Q60765 181 aa10□□□□□ -0.81
Syne1-202ENSMUST00000095899 Sipa1l3G3X9J0 1776 aa10□□□□□ -0.81
Syne1-202ENSMUST00000095899 Gsdma3Q5Y4Y6 464 aa10□□□□□ -0.81
Syne1-202ENSMUST00000095899 Bloc1s4Q8VED2 215 aa10□□□□□ -0.81
Syne1-202ENSMUST00000095899 Nphp1Q9QY53 687 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms