RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Ptpn23Q6PB44 1692 aa16.85■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 PgfP49764 158 aa16.84■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Fam198bQ3UPI1 517 aa16.84■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Gga1Q8R0H9 635 aa16.84■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Chic2Q9D9G3 165 aa16.84■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Nsd2Q8BVE8 1365 aa16.84■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 Akap11E9Q777 1895 aa16.84■□□□□ 0.29
Hmgb1-202ENSMUST00000093196 HdgfP51859 237 aaKnown RBP16.83■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Tbc1d12Q6A039 696 aa16.83■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 ErfeQ6PGN1 340 aa16.83■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Iffo2Q8R2V2 512 aa16.83■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Plxnc1Q9QZC2 1574 aa16.83■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Ints3Q7TPD0 1041 aaKnown RBP16.82■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 PaskQ8CEE6 1383 aa16.81■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 OplahQ8K010 1288 aa16.81■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 PappaQ8R4K8 1624 aa16.81■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Fam83gQ5SWY7 812 aa16.8■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Spaca7Q9D2S4 182 aa16.8■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Arih1Q9Z1K5 555 aa16.8■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Akap2O54931 893 aa16.79■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Slc35g1Q8BY79 368 aa16.79■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Arhgap33Q80YF9 1305 aa16.78■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Nkx2-3P97334 362 aa16.78■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Map4P27546 1125 aaKnown RBP16.77■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Pola2P33611 600 aa16.77■□□□□ 0.28
Hmgb1-202ENSMUST00000093196 Fam184bQ0KK56 942 aa16.75■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 NgefQ8CHT1 710 aa16.75■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Znrd1-asQ8R0E5 213 aa16.75■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Rnf25Q9QZR0 456 aa16.75■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Megf6Q80V70 1572 aa16.74■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Pkd2O35245 966 aa16.74■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Q8BT18 775 aa16.74■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Mex3cQ05A36 652 aaKnown RBP16.73■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Bsdc1Q80Y55 427 aa16.73■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Zeb2Q9R0G7 1215 aa16.73■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Cyp8b1O88962 500 aa16.72■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Pde3aQ9Z0X4 1141 aa16.72■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Polr3aB2RXC6 1390 aa16.72■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Usp19Q3UJD6 1360 aa16.72■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Rgs9O54828 675 aa16.71■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Micall1Q8BGT6 870 aa16.71■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Camkk2Q8C078 588 aa16.71■□□□□ 0.27
Hmgb1-202ENSMUST00000093196 Nid2O88322 1403 aa16.7■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Cyp2c69E9PXC3 491 aa16.7■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Cyp2c40P56657 491 aa16.7■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Ddb1Q3U1J4 1140 aaKnown RBP16.7■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Ankrd23Q812A3 306 aa16.7■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Pcdhgb4Q91XX6 912 aa16.7■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Dhx9O70133 1380 aaKnown RBP16.69■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Axin1O35625 863 aa16.69■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Hoxa2P31245 372 aa16.69■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Utp14aQ640M1 767 aaKnown RBP16.69■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Ankrd13dQ6PD24 605 aa16.69■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Pnpla7A2AJ88 1352 aa16.68■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Fyb1O35601 819 aa16.68■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Dzip1Q8BMD2 852 aa16.68■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Myo1bP46735 1107 aa16.67■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Vps33bP59016 617 aa16.67■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Slx1bQ8BX32 270 aa16.67■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 SnrkQ8VDU5 748 aa16.67■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Clstn2Q9ER65 966 aa16.67■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 March10E9PX79 788 aa16.66■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Nsd3Q6P2L6 1439 aa16.66■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Ier5lQ99J55 406 aa16.66■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Ap3b2Q9JME5 1082 aa16.66■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Nup155Q99P88 1391 aaKnown RBP16.65■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Rhox13F6YCR7 232 aa16.65■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 TsksO54887 585 aa16.65■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Fstl1Q62356 306 aa16.65■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 FcrlaQ920A9 352 aa16.65■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 Stk26Q99JT2 416 aa16.65■□□□□ 0.26
Hmgb1-202ENSMUST00000093196 NogP97466 232 aa16.63■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Col9a1Q05722 921 aa16.63■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 DaglaQ6WQJ1 1044 aa16.63■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 SowahdQ8BY98 327 aa16.63■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 FktnQ8R507 461 aa16.63■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Gm20503G3UZK1 150 aa16.62■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Sulf1Q8K007 870 aa16.62■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Lhx6Q9R1R0 363 aa16.62■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Ccdc34Q3UI66 367 aa16.61■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Afg3l2Q8JZQ2 802 aaKnown RBP16.61■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Prpmp5E9PXN1 296 aa16.59■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Adamts19P59509 1210 aa16.59■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Cep152A2AUM9 1736 aaKnown RBP16.59■□□□□ 0.25
Hmgb1-202ENSMUST00000093196 Gm21698A0A087WQP8 267 aa16.58■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Gm21671G3UY31 267 aa16.58■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Mical1Q8VDP3 1048 aa16.58■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Zfp644E9QA22 1323 aa16.58■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Arfgef2A2A5R2 1792 aa16.58■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Creld1Q91XD7 420 aa16.56■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 LrgukQ9D5S7 820 aa16.56■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Edc4Q3UJB9 1406 aaKnown RBP16.55■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Wdr44Q6NVE8 915 aa16.55■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Col23a1Q8K4G2 532 aa16.55■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Adcy9P51830 1353 aa16.54■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Armc3A2AU72 881 aa16.54■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 TraipQ8VIG6 470 aa16.54■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Fxr2Q9WVR4 673 aaKnown RBP16.54■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Plcd3Q8K2J0 785 aa16.53■□□□□ 0.24
Hmgb1-202ENSMUST00000093196 Cyp2c68K7N6C2 491 aa16.52■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms