RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Sv2bQ8BG39 683 aa27.59■■■□□ 2.01
Ptx3-201ENSMUST00000029421 Aplp1Q03157 653 aa27.58■■■□□ 2.01
Ptx3-201ENSMUST00000029421 Chpf2Q3UU43 768 aa27.58■■■□□ 2.01
Ptx3-201ENSMUST00000029421 Cdhr2E9Q7P9 1308 aa27.58■■■□□ 2.01
Ptx3-201ENSMUST00000029421 Brd1E9PZ26 1189 aaKnown RBP27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 Acsbg1Q99PU5 721 aa27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 Tnks1bp1P58871 1720 aa27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 AU015836B2RUM3 263 aa27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 Isy1Q69ZQ2 285 aaKnown RBP27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 Plcd4Q8K3R3 807 aa27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 Pdzd9Q9D9M4 266 aa27.57■■■□□ 2
Ptx3-201ENSMUST00000029421 Terf2O35144 541 aa27.56■■■□□ 2
Ptx3-201ENSMUST00000029421 Zfp142G5E869 1843 aa27.56■■■□□ 2
Ptx3-201ENSMUST00000029421 AU019823E9PUQ3 292 aa27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Eif4a1P60843 406 aaKnown RBP27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Tns2Q8CGB6 1400 aa27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Plekhd1B2RPU2 505 aa27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Btbd11Q6GQW0 1109 aa27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Gimap5Q8BWF2 308 aa27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Slx1bQ8BX32 270 aa27.55■■■□□ 2
Ptx3-201ENSMUST00000029421 Phf14Q9D4H9 881 aa27.54■■■□□ 2
Ptx3-201ENSMUST00000029421 Gm10093D3YYI8 482 aa27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 Hdac1O09106 482 aaKnown RBP27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 Kif20aP97329 887 aa27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 Dlg5E9Q9R9 1921 aa27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 Marf1Q8BJ34 1730 aaKnown RBP27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 Aldh1l2Q8K009 923 aa27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 Phkg2Q9DB30 406 aa27.53■■■□□ 2
Ptx3-201ENSMUST00000029421 LifrP42703 1092 aa27.52■■■□□ 2
Ptx3-201ENSMUST00000029421 Fam83gQ5SWY7 812 aa27.52■■■□□ 2
Ptx3-201ENSMUST00000029421 Tnnt1O88346 262 aa27.51■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Cgnl1Q6AW69 1298 aa27.51■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Smim5Q8BT42 78 aa27.51■■□□□ 1.99
Ptx3-201ENSMUST00000029421 4930572O03RikQ8C5Y0 211 aa27.51■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Fam50bQ9WTJ8 334 aa27.51■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Arhgef1Q61210 920 aaKnown RBP27.5■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Col1a2Q01149 1372 aa27.5■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Zpr1Q62384 459 aa27.49■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Phf23Q8BSN5 401 aa27.49■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Kif2cQ922S8 721 aa27.49■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Pnpla7A2AJ88 1352 aa27.49■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Pnmal2G3X9N3 661 aa27.48■■□□□ 1.99
Ptx3-201ENSMUST00000029421 ArxO35085 564 aa27.48■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Pdcl3Q8BVF2 240 aa27.48■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Cc2d1aQ8K1A6 943 aa27.48■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Catsper2A2ARP9 588 aa27.47■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Chmp7Q8R1T1 451 aa27.47■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Irx6Q9ER75 438 aa27.47■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Cnksr1A2A9K7 700 aa27.47■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Rsph3aQ3UFY4 516 aa27.47■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Amer1Q7TS75 1132 aa27.46■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Ccdc155Q80VJ8 648 aa27.46■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Mcm4P49717 862 aa27.45■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Cog6Q8R3I3 657 aa27.45■■□□□ 1.99
Ptx3-201ENSMUST00000029421 HnrnpuQ8VEK3 800 aaKnown RBP27.45■■□□□ 1.99
Ptx3-201ENSMUST00000029421 Pard3Q99NH2 1333 aa27.45■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Ssfa2Q922B9 1252 aa27.42■■□□□ 1.98
Ptx3-201ENSMUST00000029421 CoilQ5SU73 570 aa27.42■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Asic4Q7TNS7 539 aa27.42■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Fgd1P52734 960 aa27.41■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Kdm4cQ8VCD7 1054 aa27.41■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Disp3A3KFU9 1347 aa27.41■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Wdr63B2RY71 923 aa27.4■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Ybx3Q9JKB3 361 aaKnown RBP27.4■■□□□ 1.98
Ptx3-201ENSMUST00000029421 BcorQ8CGN4 1759 aa27.4■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Fkbp4P30416 458 aa27.4■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Eif3bQ8JZQ9 803 aaKnown RBP27.4■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Cyp2d11P24457 504 aa27.39■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Dnttip2Q8R2M2 758 aaKnown RBP27.39■■□□□ 1.98
Ptx3-201ENSMUST00000029421 Ubr2Q6WKZ8 1755 aa27.39■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Tm6sf1P58749 370 aa27.38■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Mcm2P97310 904 aa27.38■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Ssh1Q76I79 1042 aa27.38■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Tmem119Q8R138 280 aa27.38■■□□□ 1.97
Ptx3-201ENSMUST00000029421 GckrQ91X44 587 aa27.38■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Speer4bQ9D9F7 267 aa27.38■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Aldh8a1Q8BH00 487 aa27.37■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Znf526Q8BI66 675 aa27.37■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Bcl11bQ99PV8 884 aa27.37■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Prkar2bP31324 416 aa27.36■■□□□ 1.97
Ptx3-201ENSMUST00000029421 PsapQ61207 557 aaKnown RBP27.36■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Larp1Q6ZQ58 1072 aaKnown RBP27.36■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Anapc15-psA0A140T8L6 141 aa27.36■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Triml2E9PW10 424 aa27.35■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Trim27Q62158 513 aa27.35■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Taf7Q9R1C0 341 aa27.35■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Gcc1Q9D4H2 778 aa27.34■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Ddx54Q8K4L0 874 aaKnown RBP27.34■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Gtf2a1Q99PM3 378 aa27.34■■□□□ 1.97
Ptx3-201ENSMUST00000029421 CarsQ9ER72 831 aaKnown RBP27.34■■□□□ 1.97
Ptx3-201ENSMUST00000029421 1700010I14RikQ7TPG0 532 aa27.33■■□□□ 1.97
Ptx3-201ENSMUST00000029421 Echdc1Q9D9V3 322 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Gm21663A0A0G2JE01 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Gm21680A0A0G2JGR8 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Gm7361D3Z6R1 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 5031410I06RikE9Q4E0 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Gm1979E9QAN3 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Gm5862K7N5V5 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Gm10220K7N660 267 aa27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Bcl2l13P59017 434 aa27.32■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms