RNA–Protein interactions for RNA: ENST00000497586.5

SFMBT1-208, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 4

Gene SFMBT1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-208ENST00000497586 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
SFMBT1-208ENST00000497586 ABCC9O60706 1549 aa32.31■■■□□ 2.76
SFMBT1-208ENST00000497586 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
SFMBT1-208ENST00000497586 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
SFMBT1-208ENST00000497586 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
SFMBT1-208ENST00000497586 NACADO15069 1562 aa30.15■■■□□ 2.42
SFMBT1-208ENST00000497586 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
SFMBT1-208ENST00000497586 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
SFMBT1-208ENST00000497586 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
SFMBT1-208ENST00000497586 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.34
SFMBT1-208ENST00000497586 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
SFMBT1-208ENST00000497586 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
SFMBT1-208ENST00000497586 CECR2Q9BXF3 1484 aa29.25■■■□□ 2.27
SFMBT1-208ENST00000497586 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
SFMBT1-208ENST00000497586 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
SFMBT1-208ENST00000497586 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
SFMBT1-208ENST00000497586 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
SFMBT1-208ENST00000497586 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
SFMBT1-208ENST00000497586 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
SFMBT1-208ENST00000497586 CUX2O14529 1486 aa28.35■■■□□ 2.13
SFMBT1-208ENST00000497586 ERCC6Q03468 1493 aa27.95■■■□□ 2.07
SFMBT1-208ENST00000497586 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
SFMBT1-208ENST00000497586 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.02
SFMBT1-208ENST00000497586 HMGXB3Q12766 1538 aa27.63■■■□□ 2.01
SFMBT1-208ENST00000497586 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
SFMBT1-208ENST00000497586 SMARCA4P51532 1647 aa27.56■■■□□ 2
SFMBT1-208ENST00000497586 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
SFMBT1-208ENST00000497586 NESP48681 1621 aa27.51■■□□□ 1.99
SFMBT1-208ENST00000497586 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
SFMBT1-208ENST00000497586 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
SFMBT1-208ENST00000497586 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
SFMBT1-208ENST00000497586 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
SFMBT1-208ENST00000497586 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
SFMBT1-208ENST00000497586 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
SFMBT1-208ENST00000497586 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
SFMBT1-208ENST00000497586 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
SFMBT1-208ENST00000497586 WDR62O43379 1518 aa26.94■■□□□ 1.9
SFMBT1-208ENST00000497586 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
SFMBT1-208ENST00000497586 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
SFMBT1-208ENST00000497586 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
SFMBT1-208ENST00000497586 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
SFMBT1-208ENST00000497586 WIZO95785 1651 aa26.72■■□□□ 1.87
SFMBT1-208ENST00000497586 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
SFMBT1-208ENST00000497586 RIMBP3CA6NJZ7 1639 aa26.62■■□□□ 1.85
SFMBT1-208ENST00000497586 RIMBP3BA6NNM3 1639 aa26.62■■□□□ 1.85
SFMBT1-208ENST00000497586 RIMBP3Q9UFD9 1639 aa26.62■■□□□ 1.85
SFMBT1-208ENST00000497586 CFTRP13569 1480 aa26.53■■□□□ 1.84
SFMBT1-208ENST00000497586 URB2Q14146 1524 aaKnown RBP26.45■■□□□ 1.83
SFMBT1-208ENST00000497586 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
SFMBT1-208ENST00000497586 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
SFMBT1-208ENST00000497586 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
SFMBT1-208ENST00000497586 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
SFMBT1-208ENST00000497586 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
SFMBT1-208ENST00000497586 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
SFMBT1-208ENST00000497586 CYB5RLQ6IPT4 315 aa26.16■■□□□ 1.78
SFMBT1-208ENST00000497586 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
SFMBT1-208ENST00000497586 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
SFMBT1-208ENST00000497586 EIF4G3O43432 1585 aaKnown RBP26.1■■□□□ 1.77
SFMBT1-208ENST00000497586 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
SFMBT1-208ENST00000497586 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
SFMBT1-208ENST00000497586 CHD1O14646 1710 aa26.01■■□□□ 1.75
SFMBT1-208ENST00000497586 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
SFMBT1-208ENST00000497586 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
SFMBT1-208ENST00000497586 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
SFMBT1-208ENST00000497586 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
SFMBT1-208ENST00000497586 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
SFMBT1-208ENST00000497586 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
SFMBT1-208ENST00000497586 FBLN2P98095 1184 aa25.71■■□□□ 1.71
SFMBT1-208ENST00000497586 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
SFMBT1-208ENST00000497586 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
SFMBT1-208ENST00000497586 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
SFMBT1-208ENST00000497586 SNAPC4Q5SXM2 1469 aa25.64■■□□□ 1.69
SFMBT1-208ENST00000497586 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
SFMBT1-208ENST00000497586 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
SFMBT1-208ENST00000497586 SOGA1O94964 1423 aa25.59■■□□□ 1.69
SFMBT1-208ENST00000497586 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
SFMBT1-208ENST00000497586 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
SFMBT1-208ENST00000497586 GRIN2BQ13224 1484 aa25.49■■□□□ 1.67
SFMBT1-208ENST00000497586 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
SFMBT1-208ENST00000497586 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
SFMBT1-208ENST00000497586 CUX1P39880 1505 aa25.46■■□□□ 1.67
SFMBT1-208ENST00000497586 PBRM1Q86U86 1689 aa25.45■■□□□ 1.66
SFMBT1-208ENST00000497586 GAPVD1Q14C86 1478 aa25.42■■□□□ 1.66
SFMBT1-208ENST00000497586 ABCA5Q8WWZ7 1642 aa25.31■■□□□ 1.64
SFMBT1-208ENST00000497586 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
SFMBT1-208ENST00000497586 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
SFMBT1-208ENST00000497586 ERCC6L2Q5T890 1561 aa25.18■■□□□ 1.62
SFMBT1-208ENST00000497586 GRIN2AQ12879 1464 aa25.17■■□□□ 1.62
SFMBT1-208ENST00000497586 ADAMTS12P58397 1594 aa25.15■■□□□ 1.62
SFMBT1-208ENST00000497586 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
SFMBT1-208ENST00000497586 ILDR1Q86SU0 546 aaPredicted RBP25.12■■□□□ 1.61
SFMBT1-208ENST00000497586 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
SFMBT1-208ENST00000497586 NUP160Q12769 1436 aa25.11■■□□□ 1.61
SFMBT1-208ENST00000497586 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
SFMBT1-208ENST00000497586 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
SFMBT1-208ENST00000497586 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
SFMBT1-208ENST00000497586 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
SFMBT1-208ENST00000497586 KDM4FA0A1W2PPD8 638 aa24.95■■□□□ 1.58
SFMBT1-208ENST00000497586 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
SFMBT1-208ENST00000497586 ABCC10Q5T3U5 1492 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms