RNA–Protein interactions for RNA: ENST00000577288.5

THRA-205, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-205ENST00000577288 NISCHQ9Y2I1 1504 aa61.75■■■■■ 7.48
THRA-205ENST00000577288 CCDC180Q9P1Z9 1646 aa54.84■■■■■ 6.37
THRA-205ENST00000577288 ABCC9O60706 1549 aa53.74■■■■■ 6.19
THRA-205ENST00000577288 DCAF8L2P0C7V8 631 aa51.67■■■■■ 5.86
THRA-205ENST00000577288 RB1CC1Q8TDY2 1594 aa51.66■■■■■ 5.86
THRA-205ENST00000577288 NACADO15069 1562 aa51.62■■■■■ 5.85
THRA-205ENST00000577288 ZCCHC6Q5VYS8 1495 aaKnown RBP51.43■■■■■ 5.82
THRA-205ENST00000577288 MYO15BQ96JP2 1530 aa51.34■■■■■ 5.81
THRA-205ENST00000577288 DCAF1Q9Y4B6 1507 aa51.12■■■■■ 5.77
THRA-205ENST00000577288 UNC13AQ9UPW8 1703 aa50.33■■■■■ 5.65
THRA-205ENST00000577288 PABPN1Q86U42 306 aaKnown RBP eCLIP50.21■■■■■ 5.63
THRA-205ENST00000577288 BICRAQ9NZM4 1560 aa50.04■■■■■ 5.6
THRA-205ENST00000577288 SCRIBQ14160 1630 aa50.03■■■■■ 5.6
THRA-205ENST00000577288 DNAJC5BQ9UF47 199 aa49.77■■■■■ 5.56
THRA-205ENST00000577288 SHROOM4Q9ULL8 1493 aa49.62■■■■■ 5.53
THRA-205ENST00000577288 EIF4G1Q04637 1599 aaKnown RBP48.76■■■■■ 5.4
THRA-205ENST00000577288 CC2D2AQ9P2K1 1620 aa48.58■■■■■ 5.37
THRA-205ENST00000577288 CECR2Q9BXF3 1484 aa48.35■■■■■ 5.33
THRA-205ENST00000577288 BAZ1AQ9NRL2 1556 aaPredicted RBP47.88■■■■■ 5.25
THRA-205ENST00000577288 SMARCA4P51532 1647 aa47.87■■■■■ 5.25
THRA-205ENST00000577288 NCAPD3P42695 1498 aa47.66■■■■■ 5.22
THRA-205ENST00000577288 ATAD2BQ9ULI0 1458 aa47.66■■■■■ 5.22
THRA-205ENST00000577288 SMARCA2P51531 1590 aa47.61■■■■■ 5.21
THRA-205ENST00000577288 MROH2BQ7Z745 1585 aa47.57■■■■■ 5.21
THRA-205ENST00000577288 PEG3Q9GZU2 1588 aa47.43■■■■■ 5.18
THRA-205ENST00000577288 HMGXB3Q12766 1538 aa47.38■■■■■ 5.18
THRA-205ENST00000577288 BAZ1BQ9UIG0 1483 aaKnown RBP47.27■■■■■ 5.16
THRA-205ENST00000577288 RSF1Q96T23 1441 aaPredicted RBP47.07■■■■■ 5.13
THRA-205ENST00000577288 WIZO95785 1651 aa47.01■■■■■ 5.12
THRA-205ENST00000577288 TOP2AP11388 1531 aaKnown RBP46.57■■■■■ 5.05
THRA-205ENST00000577288 NESP48681 1621 aa46.43■■■■■ 5.02
THRA-205ENST00000577288 LAMC3Q9Y6N6 1575 aa46.36■■■■■ 5.01
THRA-205ENST00000577288 ERCC6Q03468 1493 aa46.35■■■■■ 5.01
THRA-205ENST00000577288 CADPSQ9ULU8 1353 aa46.29■■■■■ 5
THRA-205ENST00000577288 PDS5BQ9NTI5 1447 aa46.11■■■■■ 4.97
THRA-205ENST00000577288 CCDC88BA6NC98 1476 aa46.04■■■■■ 4.96
THRA-205ENST00000577288 CUX2O14529 1486 aa46.03■■■■■ 4.96
THRA-205ENST00000577288 CFTRP13569 1480 aa45.99■■■■■ 4.95
THRA-205ENST00000577288 SUPT5HO00267 1087 aaKnown RBP45.92■■■■■ 4.94
THRA-205ENST00000577288 KIF21AQ7Z4S6 1674 aa45.82■■■■■ 4.92
THRA-205ENST00000577288 THOC2Q8NI27 1593 aaKnown RBP45.77■■■■■ 4.92
THRA-205ENST00000577288 FANCD2Q9BXW9 1451 aa45.72■■■■■ 4.91
THRA-205ENST00000577288 CEP164Q9UPV0 1460 aa45.67■■■■■ 4.9
THRA-205ENST00000577288 MRC2Q9UBG0 1479 aa45.59■■■■■ 4.89
THRA-205ENST00000577288 PRDM2Q13029 1718 aa45.49■■■■■ 4.87
THRA-205ENST00000577288 WDR62O43379 1518 aa45.42■■■■■ 4.86
THRA-205ENST00000577288 URB2Q14146 1524 aaKnown RBP45.22■■■■■ 4.83
THRA-205ENST00000577288 DNAJC5Q9H3Z4 198 aa45.17■■■■■ 4.82
THRA-205ENST00000577288 ABCC8Q09428 1581 aa45.03■■■■■ 4.8
THRA-205ENST00000577288 TOPBP1Q92547 1522 aa44.97■■■■■ 4.79
THRA-205ENST00000577288 DNMBPQ6XZF7 1577 aa44.91■■■■■ 4.78
THRA-205ENST00000577288 IFT140Q96RY7 1462 aa44.72■■■■■ 4.75
THRA-205ENST00000577288 CUX1P39880 1505 aa44.61■■■■■ 4.73
THRA-205ENST00000577288 POLA1P09884 1462 aaPredicted RBP44.59■■■■■ 4.73
THRA-205ENST00000577288 FGD5Q6ZNL6 1462 aa44.49■■■■■ 4.71
THRA-205ENST00000577288 ZNF608Q9ULD9 1512 aaPredicted RBP44.47■■■■■ 4.71
THRA-205ENST00000577288 SOGA1O94964 1423 aa44.46■■■■■ 4.71
THRA-205ENST00000577288 TARBP1Q13395 1621 aaKnown RBP44.44■■■■■ 4.7
THRA-205ENST00000577288 WRNQ14191 1432 aaPredicted RBP eCLIP44.41■■■■■ 4.7
THRA-205ENST00000577288 RAD54L2Q9Y4B4 1467 aa44.4■■■■■ 4.7
THRA-205ENST00000577288 EIF4G3O43432 1585 aaKnown RBP44.26■■■■■ 4.68
THRA-205ENST00000577288 AQRO60306 1485 aaKnown RBP eCLIP44.25■■■■■ 4.672e-7■■■■■ 31.4
THRA-205ENST00000577288 TOP2BQ02880 1626 aa44.24■■■■■ 4.67
THRA-205ENST00000577288 SYNJ1O43426 1573 aa44.21■■■■■ 4.67
THRA-205ENST00000577288 BIVM-ERCC5R4GMW8 1640 aa44.21■■■■■ 4.67
THRA-205ENST00000577288 TDRD9Q8NDG6 1382 aaKnown RBP44.19■■■■■ 4.67
THRA-205ENST00000577288 WDR97A6NE52 1622 aa44.14■■■■■ 4.66
THRA-205ENST00000577288 ABCA10Q8WWZ4 1543 aa44.08■■■■■ 4.65
THRA-205ENST00000577288 OSCARQ8IYS5 282 aa44.04■■■■■ 4.64
THRA-205ENST00000577288 GRIN2BQ13224 1484 aa43.93■■■■■ 4.62
THRA-205ENST00000577288 GAPVD1Q14C86 1478 aa43.93■■■■■ 4.62
THRA-205ENST00000577288 ABCA5Q8WWZ7 1642 aa43.84■■■■■ 4.61
THRA-205ENST00000577288 SNAPC4Q5SXM2 1469 aa43.83■■■■■ 4.61
THRA-205ENST00000577288 MAGI1Q96QZ7 1491 aaPredicted RBP43.8■■■■■ 4.6
THRA-205ENST00000577288 FBLN2P98095 1184 aa43.77■■■■■ 4.6
THRA-205ENST00000577288 PBRM1Q86U86 1689 aa43.72■■■■■ 4.59
THRA-205ENST00000577288 CHMP7Q8WUX9 453 aaPredicted RBP43.68■■■■■ 4.58
THRA-205ENST00000577288 CHD1O14646 1710 aa43.65■■■■■ 4.58
THRA-205ENST00000577288 SYNJ2O15056 1496 aa43.64■■■■■ 4.58
THRA-205ENST00000577288 ERICH3Q5RHP9 1530 aa43.55■■■■■ 4.56
THRA-205ENST00000577288 KIF27Q86VH2 1401 aa43.49■■■■■ 4.55
THRA-205ENST00000577288 TRIM41Q8WV44 630 aa43.47■■■■■ 4.55
THRA-205ENST00000577288 FHAD1B1AJZ9 1412 aa43.44■■■■■ 4.54
THRA-205ENST00000577288 ADAMTS12P58397 1594 aa43.43■■■■■ 4.54
THRA-205ENST00000577288 RIMBP3CA6NJZ7 1639 aa43.37■■■■■ 4.53
THRA-205ENST00000577288 RIMBP3BA6NNM3 1639 aa43.37■■■■■ 4.53
THRA-205ENST00000577288 RIMBP3Q9UFD9 1639 aa43.37■■■■■ 4.53
THRA-205ENST00000577288 ARHGEF11O15085 1522 aa43.34■■■■■ 4.53
THRA-205ENST00000577288 GRIN2AQ12879 1464 aa43.34■■■■■ 4.53
THRA-205ENST00000577288 IGF1RP08069 1367 aa43.3■■■■■ 4.52
THRA-205ENST00000577288 CLASP1Q7Z460 1538 aa43.25■■■■■ 4.51
THRA-205ENST00000577288 NUP160Q12769 1436 aa43.15■■■■■ 4.5
THRA-205ENST00000577288 CUL7Q14999 1698 aa43.12■■■■■ 4.49
THRA-205ENST00000577288 CEP170Q5SW79 1584 aa43.07■■■■■ 4.49
THRA-205ENST00000577288 CARMIL1Q5VZK9 1371 aa43.05■■■■■ 4.48
THRA-205ENST00000577288 RUSC2Q8N2Y8 1516 aa43.02■■■■■ 4.48
THRA-205ENST00000577288 ARAP1Q96P48 1450 aa42.97■■■■■ 4.47
THRA-205ENST00000577288 CYB5RLQ6IPT4 315 aa42.95■■■■■ 4.47
THRA-205ENST00000577288 CHIC1Q5VXU3 224 aa42.86■■■■■ 4.45
THRA-205ENST00000577288 RAPGEF2Q9Y4G8 1499 aa42.79■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms