Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AC142381.4-202ENST00000563973 229 ntBASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 CR392000.1-201ENST00000624770 1228 ntBASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 AL020996.1-203ENST00000536896 2307 ntBASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.69□□□□□ -0.22
TRGV1A0A0A0MS02 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 KRT16P1-201ENST00000399124 1418 ntBASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 RPS2P4-201ENST00000476944 856 ntBASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 AC093503.3-201ENST00000624917 2352 ntBASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV1A0A0A0MS02 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 AC006333.2-201ENST00000607957 2099 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 PRORSD1P-201ENST00000295112 541 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 TSPY23P-201ENST00000440136 739 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 RARRES2P10-201ENST00000564312 460 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 AC073195.1-201ENST00000607241 877 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 AL353708.3-201ENST00000610272 989 ntBASIC13.67□□□□□ -0.22
TRGV1A0A0A0MS02 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms