Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 BCL2-203ENST00000589955 5011 ntBASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 SLC25A6P5-201ENST00000435663 894 ntBASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM56-RWDD3S4R434 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 TSPY23P-201ENST00000440136 739 ntBASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 AC090340.1-201ENST00000620778 4980 ntBASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM56-RWDD3S4R434 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms