Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEM56-RWDD3S4R434 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM56-RWDD3S4R434 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEM56-RWDD3S4R434 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 AC005181.1-201ENST00000604782 1256 ntBASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 RAP2CP1-201ENST00000605103 478 ntBASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM56-RWDD3S4R434 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 AC124283.5-201ENST00000624661 1809 ntBASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 RPS2P52-201ENST00000469610 820 ntBASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 KRT18P16-201ENST00000510337 1294 ntBASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 AC126763.1-201ENST00000552015 2118 ntBASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMEM56-RWDD3S4R434 AC067852.2-201ENST00000590513 2313 ntBASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 AC133552.2-202ENST00000575694 574 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms