Protein–RNA interactions for Protein: Q9H6D8

FNDC4, Fibronectin type III domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC4Q9H6D8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FNDC4Q9H6D8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20■□□□□ 0.79
FNDC4Q9H6D8 AP002414.2-202ENST00000590929 1450 ntBASIC20■□□□□ 0.79
FNDC4Q9H6D8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20■□□□□ 0.79
FNDC4Q9H6D8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC4Q9H6D8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20■□□□□ 0.79
FNDC4Q9H6D8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FNDC4Q9H6D8 AC135983.2-203ENST00000454486 1613 ntBASIC19.99■□□□□ 0.79
FNDC4Q9H6D8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC4Q9H6D8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.99■□□□□ 0.79
FNDC4Q9H6D8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FNDC4Q9H6D8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.98■□□□□ 0.79
FNDC4Q9H6D8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC4Q9H6D8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FNDC4Q9H6D8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC4Q9H6D8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC4Q9H6D8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.97■□□□□ 0.79
FNDC4Q9H6D8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FNDC4Q9H6D8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.96■□□□□ 0.79
FNDC4Q9H6D8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.96■□□□□ 0.79
FNDC4Q9H6D8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC4Q9H6D8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FNDC4Q9H6D8 AC108673.1-201ENST00000510422 1159 ntBASIC19.95■□□□□ 0.78
FNDC4Q9H6D8 MIR6090-201ENST00000622481 60 ntBASIC19.95■□□□□ 0.78
FNDC4Q9H6D8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.95■□□□□ 0.78
FNDC4Q9H6D8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
FNDC4Q9H6D8 WHAMMP2-203ENST00000563942 1603 ntBASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 DUX4L28-201ENST00000623687 678 ntBASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FNDC4Q9H6D8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC4Q9H6D8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC4Q9H6D8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC4Q9H6D8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FNDC4Q9H6D8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC4Q9H6D8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.92■□□□□ 0.78
FNDC4Q9H6D8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC4Q9H6D8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC4Q9H6D8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FNDC4Q9H6D8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
FNDC4Q9H6D8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
FNDC4Q9H6D8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FNDC4Q9H6D8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.91■□□□□ 0.78
FNDC4Q9H6D8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FNDC4Q9H6D8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC4Q9H6D8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.9■□□□□ 0.78
FNDC4Q9H6D8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC4Q9H6D8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FNDC4Q9H6D8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.9■□□□□ 0.78
FNDC4Q9H6D8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.89■□□□□ 0.77
FNDC4Q9H6D8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
FNDC4Q9H6D8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC4Q9H6D8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC4Q9H6D8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.88■□□□□ 0.77
FNDC4Q9H6D8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FNDC4Q9H6D8 LINC00273-201ENST00000539813 1452 ntBASIC19.88■□□□□ 0.77
FNDC4Q9H6D8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC4Q9H6D8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC4Q9H6D8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC4Q9H6D8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC4Q9H6D8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
FNDC4Q9H6D8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC4Q9H6D8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.86■□□□□ 0.77
FNDC4Q9H6D8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC4Q9H6D8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC4Q9H6D8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC4Q9H6D8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC4Q9H6D8 AC018358.1-201ENST00000631079 1402 ntBASIC19.85■□□□□ 0.77
FNDC4Q9H6D8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
FNDC4Q9H6D8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC4Q9H6D8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC4Q9H6D8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC4Q9H6D8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC4Q9H6D8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 MIR3665-201ENST00000578708 105 ntBASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC4Q9H6D8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC4Q9H6D8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.83■□□□□ 0.77
FNDC4Q9H6D8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC4Q9H6D8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC4Q9H6D8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
FNDC4Q9H6D8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
FNDC4Q9H6D8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC4Q9H6D8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FNDC4Q9H6D8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms