Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.31■■□□□ 1.64
ZC3HC1Q86WB0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ZC3HC1Q86WB0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ZC3HC1Q86WB0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.3■■□□□ 1.64
ZC3HC1Q86WB0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZC3HC1Q86WB0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.3■■□□□ 1.64
ZC3HC1Q86WB0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
ZC3HC1Q86WB0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3HC1Q86WB0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3HC1Q86WB0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
ZC3HC1Q86WB0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ZC3HC1Q86WB0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3HC1Q86WB0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.28■■□□□ 1.64
ZC3HC1Q86WB0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3HC1Q86WB0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3HC1Q86WB0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3HC1Q86WB0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.26■■□□□ 1.63
ZC3HC1Q86WB0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3HC1Q86WB0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3HC1Q86WB0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3HC1Q86WB0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3HC1Q86WB0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3HC1Q86WB0 AC087741.3-201ENST00000624270 1347 ntBASIC25.24■■□□□ 1.63
ZC3HC1Q86WB0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3HC1Q86WB0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3HC1Q86WB0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3HC1Q86WB0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3HC1Q86WB0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3HC1Q86WB0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.22■■□□□ 1.63
ZC3HC1Q86WB0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3HC1Q86WB0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3HC1Q86WB0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
ZC3HC1Q86WB0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3HC1Q86WB0 AC018358.1-201ENST00000631079 1402 ntBASIC25.2■■□□□ 1.63
ZC3HC1Q86WB0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3HC1Q86WB0 AL162393.1-201ENST00000437852 946 ntBASIC25.2■■□□□ 1.62
ZC3HC1Q86WB0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.2■■□□□ 1.62
ZC3HC1Q86WB0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3HC1Q86WB0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
ZC3HC1Q86WB0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3HC1Q86WB0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.18■■□□□ 1.62
ZC3HC1Q86WB0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3HC1Q86WB0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.17■■□□□ 1.62
ZC3HC1Q86WB0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.17■■□□□ 1.62
ZC3HC1Q86WB0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.17■■□□□ 1.62
ZC3HC1Q86WB0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3HC1Q86WB0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3HC1Q86WB0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3HC1Q86WB0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3HC1Q86WB0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.16■■□□□ 1.62
ZC3HC1Q86WB0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.15■■□□□ 1.62
ZC3HC1Q86WB0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.14■■□□□ 1.62
ZC3HC1Q86WB0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ZC3HC1Q86WB0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZC3HC1Q86WB0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.14■■□□□ 1.62
ZC3HC1Q86WB0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
ZC3HC1Q86WB0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
ZC3HC1Q86WB0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3HC1Q86WB0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
ZC3HC1Q86WB0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
ZC3HC1Q86WB0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3HC1Q86WB0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3HC1Q86WB0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3HC1Q86WB0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3HC1Q86WB0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3HC1Q86WB0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.11■■□□□ 1.61
ZC3HC1Q86WB0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3HC1Q86WB0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.11■■□□□ 1.61
ZC3HC1Q86WB0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.11■■□□□ 1.61
ZC3HC1Q86WB0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
ZC3HC1Q86WB0 AC044849.2-201ENST00000606596 710 ntBASIC25.11■■□□□ 1.61
ZC3HC1Q86WB0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
ZC3HC1Q86WB0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.1■■□□□ 1.61
ZC3HC1Q86WB0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3HC1Q86WB0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.1■■□□□ 1.61
ZC3HC1Q86WB0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3HC1Q86WB0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
ZC3HC1Q86WB0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.09■■□□□ 1.61
ZC3HC1Q86WB0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.09■■□□□ 1.61
ZC3HC1Q86WB0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZC3HC1Q86WB0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3HC1Q86WB0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.08■■□□□ 1.61
ZC3HC1Q86WB0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZC3HC1Q86WB0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
ZC3HC1Q86WB0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3HC1Q86WB0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3HC1Q86WB0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3HC1Q86WB0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3HC1Q86WB0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZC3HC1Q86WB0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms