Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TUBA1AQ71U36 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TUBA1AQ71U36 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TUBA1AQ71U36 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
TUBA1AQ71U36 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TUBA1AQ71U36 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TUBA1AQ71U36 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.13■■□□□ 1.29
TUBA1AQ71U36 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.13■■□□□ 1.29
TUBA1AQ71U36 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TUBA1AQ71U36 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.12■■□□□ 1.29
TUBA1AQ71U36 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TUBA1AQ71U36 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TUBA1AQ71U36 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TUBA1AQ71U36 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TUBA1AQ71U36 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.11■■□□□ 1.29
TUBA1AQ71U36 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TUBA1AQ71U36 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TUBA1AQ71U36 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TUBA1AQ71U36 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TUBA1AQ71U36 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TUBA1AQ71U36 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.1■■□□□ 1.29
TUBA1AQ71U36 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TUBA1AQ71U36 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TUBA1AQ71U36 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TUBA1AQ71U36 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TUBA1AQ71U36 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
TUBA1AQ71U36 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TUBA1AQ71U36 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TUBA1AQ71U36 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.08■■□□□ 1.29
TUBA1AQ71U36 AC044849.2-201ENST00000606596 710 ntBASIC23.08■■□□□ 1.29
TUBA1AQ71U36 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TUBA1AQ71U36 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.08■■□□□ 1.29
TUBA1AQ71U36 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.08■■□□□ 1.28
TUBA1AQ71U36 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TUBA1AQ71U36 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.07■■□□□ 1.28
TUBA1AQ71U36 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TUBA1AQ71U36 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
TUBA1AQ71U36 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TUBA1AQ71U36 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TUBA1AQ71U36 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TUBA1AQ71U36 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TUBA1AQ71U36 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TUBA1AQ71U36 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TUBA1AQ71U36 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TUBA1AQ71U36 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.05■■□□□ 1.28
TUBA1AQ71U36 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TUBA1AQ71U36 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TUBA1AQ71U36 AC010864.1-201ENST00000609407 1511 ntBASIC23.04■■□□□ 1.28
TUBA1AQ71U36 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TUBA1AQ71U36 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TUBA1AQ71U36 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.04■■□□□ 1.28
TUBA1AQ71U36 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TUBA1AQ71U36 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TUBA1AQ71U36 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.03■■□□□ 1.28
TUBA1AQ71U36 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TUBA1AQ71U36 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TUBA1AQ71U36 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TUBA1AQ71U36 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TUBA1AQ71U36 MIR6090-201ENST00000622481 60 ntBASIC23.02■■□□□ 1.28
TUBA1AQ71U36 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TUBA1AQ71U36 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TUBA1AQ71U36 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TUBA1AQ71U36 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
TUBA1AQ71U36 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TUBA1AQ71U36 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TUBA1AQ71U36 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 AC108673.1-201ENST00000510422 1159 ntBASIC22.98■■□□□ 1.27
TUBA1AQ71U36 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TUBA1AQ71U36 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.97■■□□□ 1.27
TUBA1AQ71U36 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TUBA1AQ71U36 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TUBA1AQ71U36 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms