Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 ALG7YBR243C 1347 nt8.2□□□□□ -1.1
RPA49Q01080 HXK1YFR053C 1458 nt8.19□□□□□ -1.1
RPA49Q01080 PUS7YOR243C 2031 nt8.19□□□□□ -1.1
RPA49Q01080 SNP1YIL061C 903 nt8.19□□□□□ -1.1
RPA49Q01080 PSP2YML017W 1782 nt8.18□□□□□ -1.1
RPA49Q01080 KAE1YKR038C 1161 nt8.18□□□□□ -1.1
RPA49Q01080 MNN9YPL050C 1188 nt8.18□□□□□ -1.1
RPA49Q01080 GTB1YDR221W 2109 nt8.17□□□□□ -1.1
RPA49Q01080 APT1YML022W 564 nt8.16□□□□□ -1.1
RPA49Q01080 FUS3YBL016W 1062 nt8.16□□□□□ -1.1
RPA49Q01080 MEX67YPL169C 1800 nt8.16□□□□□ -1.1
RPA49Q01080 snR4snR4 186 nt8.16□□□□□ -1.1
RPA49Q01080 HAC1YFL031W 717 nt8.15□□□□□ -1.1
RPA49Q01080 PET494YNR045W 1470 nt8.14□□□□□ -1.11
RPA49Q01080 SPR1YOR190W 1338 nt8.14□□□□□ -1.11
RPA49Q01080 YDR476CYDR476C 675 nt8.14□□□□□ -1.11
RPA49Q01080 PNS1YOR161C 1620 nt8.13□□□□□ -1.11
RPA49Q01080 KTR4YBR199W 1395 nt8.12□□□□□ -1.11
RPA49Q01080 DIA4YHR011W 1341 nt8.12□□□□□ -1.11
RPA49Q01080 RRT6YGL146C 936 nt8.12□□□□□ -1.11
RPA49Q01080 CPT1YNL130C 1182 nt8.12□□□□□ -1.11
RPA49Q01080 MTC6YHR151C 1581 nt8.11□□□□□ -1.11
RPA49Q01080 EDC2YER035W 438 nt8.1□□□□□ -1.11
RPA49Q01080 GAL2YLR081W 1725 nt8.09□□□□□ -1.11
RPA49Q01080 DST1YGL043W 930 nt8.09□□□□□ -1.11
RPA49Q01080 YOR268CYOR268C 399 nt8.09□□□□□ -1.11
RPA49Q01080 ELP6YMR312W 822 nt8.08□□□□□ -1.12
RPA49Q01080 URA8YJR103W 1737 nt8.06□□□□□ -1.12
RPA49Q01080 CPR2YHR057C 618 nt8.06□□□□□ -1.12
RPA49Q01080 AOS1YPR180W 1044 nt8.05□□□□□ -1.12
RPA49Q01080 TOK1YJL093C 2076 nt8.04□□□□□ -1.12
RPA49Q01080 DUS3YLR401C 2007 nt8.04□□□□□ -1.12
RPA49Q01080 HAM1YJR069C 594 nt8.04□□□□□ -1.12
RPA49Q01080 YML034C-AYML034C-A 399 nt8.03□□□□□ -1.12
RPA49Q01080 STE3YKL178C 1413 nt8.03□□□□□ -1.12
RPA49Q01080 RPL2AYFR031C-A 765 nt8.02□□□□□ -1.13
RPA49Q01080 TES1YJR019C 1050 nt8.02□□□□□ -1.13
RPA49Q01080 CDA1YLR307W 906 nt8.02□□□□□ -1.13
RPA49Q01080 YLR358CYLR358C 564 nt8.02□□□□□ -1.13
RPA49Q01080 TPO1YLL028W 1761 nt8.02□□□□□ -1.13
RPA49Q01080 ADE16YLR028C 1776 nt8.02□□□□□ -1.13
RPA49Q01080 NCA3YJL116C 1014 nt8.01□□□□□ -1.13
RPA49Q01080 YNL295WYNL295W 1575 nt8.01□□□□□ -1.13
RPA49Q01080 GNP1YDR508C 1992 nt8.01□□□□□ -1.13
RPA49Q01080 RRP43YCR035C 1185 nt8□□□□□ -1.13
RPA49Q01080 INP54YOL065C 1155 nt8□□□□□ -1.13
RPA49Q01080 PMT1YDL095W 2454 nt7.99□□□□□ -1.13
RPA49Q01080 YHR033WYHR033W 1272 nt7.99□□□□□ -1.13
RPA49Q01080 STS1YIR011C 960 nt7.99□□□□□ -1.13
RPA49Q01080 ERV2YPR037C 591 nt7.99□□□□□ -1.13
RPA49Q01080 MET13YGL125W 1803 nt7.99□□□□□ -1.13
RPA49Q01080 PSA1YDL055C 1086 nt7.97□□□□□ -1.13
RPA49Q01080 BAP3YDR046C 1815 nt7.96□□□□□ -1.13
RPA49Q01080 AVL9YLR114C 2295 nt7.96□□□□□ -1.14
RPA49Q01080 CRN1YLR429W 1956 nt7.95□□□□□ -1.14
RPA49Q01080 YJR142WYJR142W 1029 nt7.95□□□□□ -1.14
RPA49Q01080 PRE5YMR314W 705 nt7.95□□□□□ -1.14
RPA49Q01080 CKB1YGL019W 837 nt7.94□□□□□ -1.14
RPA49Q01080 MDH2YOL126C 1134 nt7.94□□□□□ -1.14
RPA49Q01080 YPC1YBR183W 951 nt7.93□□□□□ -1.14
RPA49Q01080 YPT10YBR264C 600 nt7.93□□□□□ -1.14
RPA49Q01080 OSM1YJR051W 1506 nt7.93□□□□□ -1.14
RPA49Q01080 PMT7YDR307W 1989 nt7.92□□□□□ -1.14
RPA49Q01080 GET2YER083C 858 nt7.92□□□□□ -1.14
RPA49Q01080 MDL2YPL270W 2322 nt7.92□□□□□ -1.14
RPA49Q01080 SPS1YDR523C 1473 nt7.92□□□□□ -1.14
RPA49Q01080 PET10YKR046C 852 nt7.91□□□□□ -1.14
RPA49Q01080 MFG1YDL233W 1377 nt7.91□□□□□ -1.14
RPA49Q01080 PPZ2YDR436W 2133 nt7.9□□□□□ -1.14
RPA49Q01080 NMA2YGR010W 1188 nt7.9□□□□□ -1.14
RPA49Q01080 DAL80YKR034W 810 nt7.9□□□□□ -1.14
RPA49Q01080 MSI1YBR195C 1269 nt7.9□□□□□ -1.14
RPA49Q01080 SDH8YBR269C 417 nt7.9□□□□□ -1.14
RPA49Q01080 PEX28YHR150W 1740 nt7.89□□□□□ -1.15
RPA49Q01080 PDC5YLR134W 1692 nt7.89□□□□□ -1.15
RPA49Q01080 MAS2YHR024C 1449 nt7.89□□□□□ -1.15
RPA49Q01080 PFS2YNL317W 1398 nt7.89□□□□□ -1.15
RPA49Q01080 YGL081WYGL081W 963 nt7.89□□□□□ -1.15
RPA49Q01080 DOC1YGL240W 753 nt7.89□□□□□ -1.15
RPA49Q01080 ERV25YML012W 636 nt7.89□□□□□ -1.15
RPA49Q01080 DSC3YOR223W 879 nt7.89□□□□□ -1.15
RPA49Q01080 FIT1YDR534C 1587 nt7.88□□□□□ -1.15
RPA49Q01080 HRB1YNL004W 1365 nt7.88□□□□□ -1.15
RPA49Q01080 YML079WYML079W 606 nt7.88□□□□□ -1.15
RPA49Q01080 HSV2YGR223C 1347 nt7.87□□□□□ -1.15
RPA49Q01080 VPS65YLR322W 315 nt7.87□□□□□ -1.15
RPA49Q01080 RCF2YNR018W 675 nt7.87□□□□□ -1.15
RPA49Q01080 MET8YBR213W 825 nt7.87□□□□□ -1.15
RPA49Q01080 YDR215CYDR215C 414 nt7.86□□□□□ -1.15
RPA49Q01080 RSC9YML127W 1746 nt7.86□□□□□ -1.15
RPA49Q01080 LEO1YOR123C 1395 nt7.85□□□□□ -1.15
RPA49Q01080 CDC3YLR314C 1563 nt7.85□□□□□ -1.15
RPA49Q01080 SGF73YGL066W 1974 nt7.85□□□□□ -1.15
RPA49Q01080 ATP23YNR020C 813 nt7.85□□□□□ -1.15
RPA49Q01080 YRF1-1YDR545W 5391 nt7.84□□□□□ -1.15
RPA49Q01080 YRF1-5YLR467W 5391 nt7.84□□□□□ -1.15
RPA49Q01080 YRF1-8YOR396W 5391 nt7.84□□□□□ -1.15
RPA49Q01080 SKP1YDR328C 585 nt7.84□□□□□ -1.15
RPA49Q01080 YEL034C-AYEL034C-A 603 nt7.84□□□□□ -1.15
RPA49Q01080 OPI1YHL020C 1215 nt7.84□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms