Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 SRM1YGL097W 1449 nt9.15□□□□□ -0.94
MSH4P40965 MRS4YKR052C 915 nt9.15□□□□□ -0.94
MSH4P40965 RHO1YPR165W 630 nt9.15□□□□□ -0.94
MSH4P40965 MLS1YNL117W 1665 nt9.15□□□□□ -0.94
MSH4P40965 ADE5,7YGL234W 2409 nt9.15□□□□□ -0.94
MSH4P40965 NUP53YMR153W 1428 nt9.14□□□□□ -0.95
MSH4P40965 AAT1YKL106W 1356 nt9.14□□□□□ -0.95
MSH4P40965 COG1YGL223C 1254 nt9.14□□□□□ -0.95
MSH4P40965 SRN2YLR119W 642 nt9.14□□□□□ -0.95
MSH4P40965 FRT1YOR324C 1809 nt9.14□□□□□ -0.95
MSH4P40965 YLR072WYLR072W 2082 nt9.14□□□□□ -0.95
MSH4P40965 AI5_BETAQ0075 1065 nt9.13□□□□□ -0.95
MSH4P40965 YIL168WYIL168W 384 nt9.13□□□□□ -0.95
MSH4P40965 YIR018C-AYIR018C-A 138 nt9.12□□□□□ -0.95
MSH4P40965 BUB2YMR055C 921 nt9.12□□□□□ -0.95
MSH4P40965 THI73YLR004C 1572 nt9.12□□□□□ -0.95
MSH4P40965 ATP2YJR121W 1536 nt9.11□□□□□ -0.95
MSH4P40965 CBK1YNL161W 2271 nt9.11□□□□□ -0.95
MSH4P40965 ADE16YLR028C 1776 nt9.11□□□□□ -0.95
MSH4P40965 YPL247CYPL247C 1572 nt9.11□□□□□ -0.95
MSH4P40965 YBR056WYBR056W 1506 nt9.1□□□□□ -0.95
MSH4P40965 PMA2YPL036W 2844 nt9.1□□□□□ -0.95
MSH4P40965 YDR476CYDR476C 675 nt9.1□□□□□ -0.95
MSH4P40965 YJL009WYJL009W 327 nt9.1□□□□□ -0.95
MSH4P40965 FTH1YBR207W 1398 nt9.08□□□□□ -0.96
MSH4P40965 NDE1YMR145C 1683 nt9.07□□□□□ -0.96
MSH4P40965 GGC1YDL198C 903 nt9.06□□□□□ -0.96
MSH4P40965 snR86snR86 1004 nt9.06□□□□□ -0.96
MSH4P40965 ORT1YOR130C 879 nt9.06□□□□□ -0.96
MSH4P40965 AIM34YMR003W 597 nt9.04□□□□□ -0.96
MSH4P40965 snR4snR4 186 nt9.04□□□□□ -0.96
MSH4P40965 MEP1YGR121C 1479 nt9.03□□□□□ -0.96
MSH4P40965 PUP3YER094C 618 nt9.03□□□□□ -0.96
MSH4P40965 RRT6YGL146C 936 nt9.03□□□□□ -0.96
MSH4P40965 FAF1YIL019W 1041 nt9.03□□□□□ -0.96
MSH4P40965 YLR358CYLR358C 564 nt9.03□□□□□ -0.96
MSH4P40965 PFS2YNL317W 1398 nt9.02□□□□□ -0.97
MSH4P40965 SHC1YER096W 1539 nt9.02□□□□□ -0.97
MSH4P40965 BEM1YBR200W 1656 nt9.02□□□□□ -0.97
MSH4P40965 MGM101YJR144W 810 nt9.02□□□□□ -0.97
MSH4P40965 CTF3YLR381W 2202 nt9.01□□□□□ -0.97
MSH4P40965 PMU1YKL128C 888 nt9.01□□□□□ -0.97
MSH4P40965 YRF1-1YDR545W 5391 nt9.01□□□□□ -0.97
MSH4P40965 YRF1-5YLR467W 5391 nt9.01□□□□□ -0.97
MSH4P40965 YRF1-8YOR396W 5391 nt9.01□□□□□ -0.97
MSH4P40965 HAC1YFL031W 717 nt8.99□□□□□ -0.97
MSH4P40965 PSP2YML017W 1782 nt8.99□□□□□ -0.97
MSH4P40965 ABP1YCR088W 1779 nt8.98□□□□□ -0.97
MSH4P40965 COS10YNR075W 1125 nt8.97□□□□□ -0.97
MSH4P40965 PRE10YOR362C 867 nt8.97□□□□□ -0.97
MSH4P40965 YTH1YPR107C 627 nt8.97□□□□□ -0.97
MSH4P40965 TOP3YLR234W 1971 nt8.97□□□□□ -0.97
MSH4P40965 LRO1YNR008W 1986 nt8.96□□□□□ -0.98
MSH4P40965 LEA1YPL213W 717 nt8.96□□□□□ -0.98
MSH4P40965 HSV2YGR223C 1347 nt8.96□□□□□ -0.98
MSH4P40965 EHT1YBR177C 1356 nt8.96□□□□□ -0.98
MSH4P40965 JHD1YER051W 1479 nt8.96□□□□□ -0.98
MSH4P40965 ITR1YDR497C 1755 nt8.95□□□□□ -0.98
MSH4P40965 RPR1RPR1 369 nt8.95□□□□□ -0.98
MSH4P40965 YHL030W-AYHL030W-A 462 nt8.94□□□□□ -0.98
MSH4P40965 MAM3YOL060C 2121 nt8.94□□□□□ -0.98
MSH4P40965 TIM50YPL063W 1431 nt8.94□□□□□ -0.98
MSH4P40965 YML079WYML079W 606 nt8.93□□□□□ -0.98
MSH4P40965 YNL067W-AYNL067W-A 147 nt8.93□□□□□ -0.98
MSH4P40965 ADE2YOR128C 1716 nt8.93□□□□□ -0.98
MSH4P40965 HXT8YJL214W 1710 nt8.92□□□□□ -0.98
MSH4P40965 IDP3YNL009W 1263 nt8.92□□□□□ -0.98
MSH4P40965 PNS1YOR161C 1620 nt8.91□□□□□ -0.98
MSH4P40965 KDX1YKL161C 1302 nt8.91□□□□□ -0.98
MSH4P40965 CPT1YNL130C 1182 nt8.91□□□□□ -0.98
MSH4P40965 SPR1YOR190W 1338 nt8.9□□□□□ -0.98
MSH4P40965 CHA1YCL064C 1083 nt8.9□□□□□ -0.98
MSH4P40965 RCF1YML030W 480 nt8.9□□□□□ -0.98
MSH4P40965 ATG22YCL038C 1587 nt8.9□□□□□ -0.99
MSH4P40965 ATP10YLR393W 840 nt8.89□□□□□ -0.99
MSH4P40965 CCR4YAL021C 2514 nt8.88□□□□□ -0.99
MSH4P40965 BUD31YCR063W 474 nt8.88□□□□□ -0.99
MSH4P40965 SLM3YDL033C 1254 nt8.88□□□□□ -0.99
MSH4P40965 HIS3YOR202W 663 nt8.88□□□□□ -0.99
MSH4P40965 DIP5YPL265W 1827 nt8.88□□□□□ -0.99
MSH4P40965 YIL108WYIL108W 2091 nt8.88□□□□□ -0.99
MSH4P40965 APT1YML022W 564 nt8.87□□□□□ -0.99
MSH4P40965 AFG2YLR397C 2343 nt8.87□□□□□ -0.99
MSH4P40965 DIA4YHR011W 1341 nt8.86□□□□□ -0.99
MSH4P40965 PUP2YGR253C 783 nt8.86□□□□□ -0.99
MSH4P40965 YHM2YMR241W 945 nt8.86□□□□□ -0.99
MSH4P40965 YRF1-3YGR296W 5580 nt8.86□□□□□ -0.99
MSH4P40965 YRF1-6YNL339C 5580 nt8.86□□□□□ -0.99
MSH4P40965 YRF1-7YPL283C 5580 nt8.86□□□□□ -0.99
MSH4P40965 INO1YJL153C 1602 nt8.86□□□□□ -0.99
MSH4P40965 PRC1YMR297W 1599 nt8.86□□□□□ -0.99
MSH4P40965 ARP10YDR106W 855 nt8.85□□□□□ -0.99
MSH4P40965 NCA3YJL116C 1014 nt8.85□□□□□ -0.99
MSH4P40965 PUS5YLR165C 765 nt8.85□□□□□ -0.99
MSH4P40965 HMT1YBR034C 1047 nt8.85□□□□□ -0.99
MSH4P40965 YHR131CYHR131C 2553 nt8.84□□□□□ -0.99
MSH4P40965 SNU66YOR308C 1764 nt8.84□□□□□ -1
MSH4P40965 MDH2YOL126C 1134 nt8.83□□□□□ -1
MSH4P40965 NDE2YDL085W 1638 nt8.83□□□□□ -1
MSH4P40965 WSC3YOL105C 1671 nt8.81□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 141.4 ms