Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 ARO3YDR035W 1113 nt6.86□□□□□ -1.31
SSH1P38353 RRT14YIL127C 621 nt6.86□□□□□ -1.31
SSH1P38353 YPL108WYPL108W 507 nt6.86□□□□□ -1.31
SSH1P38353 ECM27YJR106W 2178 nt6.86□□□□□ -1.31
SSH1P38353 SLM3YDL033C 1254 nt6.85□□□□□ -1.31
SSH1P38353 YHL030W-AYHL030W-A 462 nt6.85□□□□□ -1.31
SSH1P38353 THI73YLR004C 1572 nt6.85□□□□□ -1.31
SSH1P38353 HXT8YJL214W 1710 nt6.84□□□□□ -1.31
SSH1P38353 TOS2YGR221C 1869 nt6.84□□□□□ -1.31
SSH1P38353 NAP1YKR048C 1254 nt6.84□□□□□ -1.31
SSH1P38353 LSP1YPL004C 1026 nt6.84□□□□□ -1.31
SSH1P38353 SHC1YER096W 1539 nt6.84□□□□□ -1.31
SSH1P38353 NMD5YJR132W 3147 nt6.83□□□□□ -1.32
SSH1P38353 MET13YGL125W 1803 nt6.83□□□□□ -1.32
SSH1P38353 PRC1YMR297W 1599 nt6.83□□□□□ -1.32
SSH1P38353 TGA1tA(UGC)A 73 nt6.83□□□□□ -1.32
SSH1P38353 tA(UGC)EtA(UGC)E 73 nt6.83□□□□□ -1.32
SSH1P38353 tA(UGC)GtA(UGC)G 73 nt6.83□□□□□ -1.32
SSH1P38353 tA(UGC)LtA(UGC)L 73 nt6.83□□□□□ -1.32
SSH1P38353 tA(UGC)OtA(UGC)O 73 nt6.83□□□□□ -1.32
SSH1P38353 FCP1YMR277W 2199 nt6.83□□□□□ -1.32
SSH1P38353 YER152CYER152C 1332 nt6.82□□□□□ -1.32
SSH1P38353 YEL034C-AYEL034C-A 603 nt6.82□□□□□ -1.32
SSH1P38353 YPT31YER031C 672 nt6.82□□□□□ -1.32
SSH1P38353 PRP2YNR011C 2631 nt6.82□□□□□ -1.32
SSH1P38353 HSM3YBR272C 1443 nt6.81□□□□□ -1.32
SSH1P38353 PRE10YOR362C 867 nt6.8□□□□□ -1.32
SSH1P38353 ADE17YMR120C 1779 nt6.8□□□□□ -1.32
SSH1P38353 TIM50YPL063W 1431 nt6.79□□□□□ -1.32
SSH1P38353 YMR253CYMR253C 1245 nt6.79□□□□□ -1.32
SSH1P38353 ASN2YGR124W 1719 nt6.79□□□□□ -1.32
SSH1P38353 PMT1YDL095W 2454 nt6.78□□□□□ -1.32
SSH1P38353 SNP1YIL061C 903 nt6.78□□□□□ -1.32
SSH1P38353 SWM1YDR260C 513 nt6.77□□□□□ -1.33
SSH1P38353 PMU1YKL128C 888 nt6.77□□□□□ -1.33
SSH1P38353 ELP6YMR312W 822 nt6.77□□□□□ -1.33
SSH1P38353 FCY1YPR062W 477 nt6.77□□□□□ -1.33
SSH1P38353 CDA1YLR307W 906 nt6.76□□□□□ -1.33
SSH1P38353 ERG6YML008C 1152 nt6.76□□□□□ -1.33
SSH1P38353 DAL7YIR031C 1665 nt6.76□□□□□ -1.33
SSH1P38353 CIR2YOR356W 1896 nt6.76□□□□□ -1.33
SSH1P38353 RSC9YML127W 1746 nt6.76□□□□□ -1.33
SSH1P38353 ERR3YMR323W 1314 nt6.76□□□□□ -1.33
SSH1P38353 ERR1YOR393W 1314 nt6.76□□□□□ -1.33
SSH1P38353 ERR2YPL281C 1314 nt6.76□□□□□ -1.33
SSH1P38353 SGF73YGL066W 1974 nt6.75□□□□□ -1.33
SSH1P38353 YCP4YCR004C 744 nt6.75□□□□□ -1.33
SSH1P38353 YER156CYER156C 1017 nt6.75□□□□□ -1.33
SSH1P38353 CKB1YGL019W 837 nt6.75□□□□□ -1.33
SSH1P38353 TES1YJR019C 1050 nt6.75□□□□□ -1.33
SSH1P38353 BXI1YNL305C 894 nt6.75□□□□□ -1.33
SSH1P38353 YOS9YDR057W 1629 nt6.75□□□□□ -1.33
SSH1P38353 MTC6YHR151C 1581 nt6.74□□□□□ -1.33
SSH1P38353 JHD1YER051W 1479 nt6.74□□□□□ -1.33
SSH1P38353 YEN1YER041W 2280 nt6.74□□□□□ -1.33
SSH1P38353 TPO1YLL028W 1761 nt6.74□□□□□ -1.33
SSH1P38353 AVL9YLR114C 2295 nt6.74□□□□□ -1.33
SSH1P38353 ARG7YMR062C 1326 nt6.74□□□□□ -1.33
SSH1P38353 SAM50YNL026W 1455 nt6.73□□□□□ -1.33
SSH1P38353 YPR084WYPR084W 1371 nt6.73□□□□□ -1.33
SSH1P38353 YJL160CYJL160C 864 nt6.73□□□□□ -1.33
SSH1P38353 AQR1YNL065W 1761 nt6.72□□□□□ -1.33
SSH1P38353 PET18YCR020C 648 nt6.72□□□□□ -1.33
SSH1P38353 SPE4YLR146C 903 nt6.72□□□□□ -1.33
SSH1P38353 YMR206WYMR206W 942 nt6.72□□□□□ -1.33
SSH1P38353 PUP1YOR157C 786 nt6.72□□□□□ -1.33
SSH1P38353 RPS6AYPL090C 711 nt6.72□□□□□ -1.33
SSH1P38353 RPS6BYBR181C 711 nt6.72□□□□□ -1.33
SSH1P38353 YBL111CYBL111C 2004 nt6.72□□□□□ -1.33
SSH1P38353 EDC3YEL015W 1656 nt6.71□□□□□ -1.33
SSH1P38353 ACO1YLR304C 2337 nt6.71□□□□□ -1.33
SSH1P38353 PEX28YHR150W 1740 nt6.71□□□□□ -1.34
SSH1P38353 RRT6YGL146C 936 nt6.71□□□□□ -1.34
SSH1P38353 YMR007WYMR007W 381 nt6.71□□□□□ -1.34
SSH1P38353 YPL264CYPL264C 1062 nt6.71□□□□□ -1.34
SSH1P38353 PDC5YLR134W 1692 nt6.71□□□□□ -1.34
SSH1P38353 ATP2YJR121W 1536 nt6.71□□□□□ -1.34
SSH1P38353 HXT9YJL219W 1704 nt6.7□□□□□ -1.34
SSH1P38353 RUP1YOR138C 2016 nt6.69□□□□□ -1.34
SSH1P38353 MNN9YPL050C 1188 nt6.69□□□□□ -1.34
SSH1P38353 DST1YGL043W 930 nt6.68□□□□□ -1.34
SSH1P38353 SLG1YOR008C 1137 nt6.68□□□□□ -1.34
SSH1P38353 AOS1YPR180W 1044 nt6.68□□□□□ -1.34
SSH1P38353 VTS1YOR359W 1572 nt6.67□□□□□ -1.34
SSH1P38353 SGE1YPR198W 1632 nt6.67□□□□□ -1.34
SSH1P38353 YIP4YGL198W 708 nt6.66□□□□□ -1.34
SSH1P38353 CPR2YHR057C 618 nt6.66□□□□□ -1.34
SSH1P38353 HAM1YJR069C 594 nt6.66□□□□□ -1.34
SSH1P38353 MFT1YML062C 1179 nt6.66□□□□□ -1.34
SSH1P38353 RCR1YBR005W 642 nt6.66□□□□□ -1.34
SSH1P38353 ICL2YPR006C 1728 nt6.65□□□□□ -1.34
SSH1P38353 YHR033WYHR033W 1272 nt6.64□□□□□ -1.35
SSH1P38353 PET10YKR046C 852 nt6.63□□□□□ -1.35
SSH1P38353 RCF2YNR018W 675 nt6.63□□□□□ -1.35
SSH1P38353 LEO1YOR123C 1395 nt6.62□□□□□ -1.35
SSH1P38353 SNF7YLR025W 723 nt6.62□□□□□ -1.35
SSH1P38353 AGP2YBR132C 1791 nt6.62□□□□□ -1.35
SSH1P38353 YLR030WYLR030W 792 nt6.61□□□□□ -1.35
SSH1P38353 POB3YML069W 1659 nt6.61□□□□□ -1.35
SSH1P38353 UTR5YEL035C 501 nt6.6□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms