Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.42■■□□□ 1.98
LRRC53A6NM62 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
LRRC53A6NM62 AC108673.1-201ENST00000510422 1159 ntBASIC27.42■■□□□ 1.98
LRRC53A6NM62 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.42■■□□□ 1.98
LRRC53A6NM62 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.42■■□□□ 1.98
LRRC53A6NM62 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
LRRC53A6NM62 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
LRRC53A6NM62 WHAMMP2-203ENST00000563942 1603 ntBASIC27.41■■□□□ 1.98
LRRC53A6NM62 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
LRRC53A6NM62 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
LRRC53A6NM62 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
LRRC53A6NM62 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
LRRC53A6NM62 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
LRRC53A6NM62 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LRRC53A6NM62 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.38■■□□□ 1.97
LRRC53A6NM62 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LRRC53A6NM62 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
LRRC53A6NM62 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
LRRC53A6NM62 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LRRC53A6NM62 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
LRRC53A6NM62 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LRRC53A6NM62 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.36■■□□□ 1.97
LRRC53A6NM62 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.36■■□□□ 1.97
LRRC53A6NM62 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LRRC53A6NM62 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.36■■□□□ 1.97
LRRC53A6NM62 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.35■■□□□ 1.97
LRRC53A6NM62 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
LRRC53A6NM62 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.34■■□□□ 1.97
LRRC53A6NM62 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LRRC53A6NM62 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
LRRC53A6NM62 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LRRC53A6NM62 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
LRRC53A6NM62 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LRRC53A6NM62 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.33■■□□□ 1.97
LRRC53A6NM62 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LRRC53A6NM62 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.32■■□□□ 1.96
LRRC53A6NM62 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
LRRC53A6NM62 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
LRRC53A6NM62 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
LRRC53A6NM62 LINC00273-201ENST00000539813 1452 ntBASIC27.32■■□□□ 1.96
LRRC53A6NM62 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
LRRC53A6NM62 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.31■■□□□ 1.96
LRRC53A6NM62 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
LRRC53A6NM62 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LRRC53A6NM62 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LRRC53A6NM62 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.3■■□□□ 1.96
LRRC53A6NM62 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LRRC53A6NM62 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.29■■□□□ 1.96
LRRC53A6NM62 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LRRC53A6NM62 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
LRRC53A6NM62 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LRRC53A6NM62 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.28■■□□□ 1.96
LRRC53A6NM62 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.28■■□□□ 1.96
LRRC53A6NM62 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.28■■□□□ 1.96
LRRC53A6NM62 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
LRRC53A6NM62 MIR3665-201ENST00000578708 105 ntBASIC27.28■■□□□ 1.96
LRRC53A6NM62 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LRRC53A6NM62 AC018358.1-201ENST00000631079 1402 ntBASIC27.27■■□□□ 1.96
LRRC53A6NM62 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.27■■□□□ 1.96
LRRC53A6NM62 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRRC53A6NM62 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRRC53A6NM62 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRRC53A6NM62 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRRC53A6NM62 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LRRC53A6NM62 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.24■■□□□ 1.95
LRRC53A6NM62 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LRRC53A6NM62 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
LRRC53A6NM62 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LRRC53A6NM62 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LRRC53A6NM62 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LRRC53A6NM62 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LRRC53A6NM62 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
LRRC53A6NM62 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LRRC53A6NM62 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LRRC53A6NM62 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LRRC53A6NM62 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
LRRC53A6NM62 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
LRRC53A6NM62 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
LRRC53A6NM62 AP006261.1-201ENST00000584783 668 ntBASIC27.2■■□□□ 1.94
LRRC53A6NM62 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LRRC53A6NM62 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LRRC53A6NM62 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.19■■□□□ 1.94
LRRC53A6NM62 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.19■■□□□ 1.94
LRRC53A6NM62 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.19■■□□□ 1.94
LRRC53A6NM62 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
LRRC53A6NM62 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.18■■□□□ 1.94
LRRC53A6NM62 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LRRC53A6NM62 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
LRRC53A6NM62 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
LRRC53A6NM62 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.17■■□□□ 1.94
LRRC53A6NM62 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LRRC53A6NM62 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LRRC53A6NM62 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
LRRC53A6NM62 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
LRRC53A6NM62 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.16■■□□□ 1.94
LRRC53A6NM62 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.16■■□□□ 1.94
LRRC53A6NM62 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.16■■□□□ 1.94
LRRC53A6NM62 AC087741.3-201ENST00000624270 1347 ntBASIC27.16■■□□□ 1.94
LRRC53A6NM62 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.15■■□□□ 1.94
LRRC53A6NM62 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms