Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 FEM1AP3-201ENST00000403722 1741 ntBASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 PCDHB18P-201ENST00000524813 2368 ntBASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 OR10C1-204ENST00000622521 1039 ntBASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM56-RWDD3S4R434 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.71■□□□□ 0.1
TMEM56-RWDD3S4R434 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.71■□□□□ 0.1
TMEM56-RWDD3S4R434 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.71■□□□□ 0.1
TMEM56-RWDD3S4R434 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 MIR638-201ENST00000385237 100 ntBASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 BID-214ENST00000617586 542 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM56-RWDD3S4R434 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEM56-RWDD3S4R434 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms