RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
TUBA4A-201ENST00000248437 CCDC180Q9P1Z9 1646 aa35.4■■■■□ 3.26
TUBA4A-201ENST00000248437 ZCCHC6Q5VYS8 1495 aaKnown RBP34.34■■■■□ 3.09
TUBA4A-201ENST00000248437 ABCC9O60706 1549 aa33.81■■■■□ 3
TUBA4A-201ENST00000248437 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
TUBA4A-201ENST00000248437 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
TUBA4A-201ENST00000248437 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
TUBA4A-201ENST00000248437 MYO15BQ96JP2 1530 aa33.12■■■□□ 2.89
TUBA4A-201ENST00000248437 NACADO15069 1562 aa33.02■■■□□ 2.88
TUBA4A-201ENST00000248437 RB1CC1Q8TDY2 1594 aa32.8■■■□□ 2.84
TUBA4A-201ENST00000248437 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
TUBA4A-201ENST00000248437 SUPT5HO00267 1087 aaKnown RBP32.61■■■□□ 2.81
TUBA4A-201ENST00000248437 UNC13AQ9UPW8 1703 aa32.22■■■□□ 2.75
TUBA4A-201ENST00000248437 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
TUBA4A-201ENST00000248437 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
TUBA4A-201ENST00000248437 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
TUBA4A-201ENST00000248437 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
TUBA4A-201ENST00000248437 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
TUBA4A-201ENST00000248437 MROH2BQ7Z745 1585 aa31.48■■■□□ 2.63
TUBA4A-201ENST00000248437 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
TUBA4A-201ENST00000248437 WIZO95785 1651 aa31.29■■■□□ 2.6
TUBA4A-201ENST00000248437 SMARCA4P51532 1647 aa31.26■■■□□ 2.6
TUBA4A-201ENST00000248437 TOP2AP11388 1531 aaKnown RBP30.96■■■□□ 2.55
TUBA4A-201ENST00000248437 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
TUBA4A-201ENST00000248437 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
TUBA4A-201ENST00000248437 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
TUBA4A-201ENST00000248437 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
TUBA4A-201ENST00000248437 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.49
TUBA4A-201ENST00000248437 TRIM41Q8WV44 630 aa30.63■■■□□ 2.49
TUBA4A-201ENST00000248437 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
TUBA4A-201ENST00000248437 CC2D2AQ9P2K1 1620 aa30.54■■■□□ 2.48
TUBA4A-201ENST00000248437 NCAPD3P42695 1498 aa30.51■■■□□ 2.48
TUBA4A-201ENST00000248437 HMGXB3Q12766 1538 aa30.45■■■□□ 2.46
TUBA4A-201ENST00000248437 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
TUBA4A-201ENST00000248437 ABCC8Q09428 1581 aa30.21■■■□□ 2.43
TUBA4A-201ENST00000248437 FAM9AQ8IZU1 332 aaPredicted RBP30.07■■■□□ 2.4
TUBA4A-201ENST00000248437 DNAJC5BQ9UF47 199 aa30.04■■■□□ 2.4
TUBA4A-201ENST00000248437 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
TUBA4A-201ENST00000248437 EEA1Q15075 1411 aa29.83■■■□□ 2.37
TUBA4A-201ENST00000248437 CFTRP13569 1480 aa29.82■■■□□ 2.36
TUBA4A-201ENST00000248437 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
TUBA4A-201ENST00000248437 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
TUBA4A-201ENST00000248437 SOGA1O94964 1423 aa29.73■■■□□ 2.35
TUBA4A-201ENST00000248437 NESP48681 1621 aa29.66■■■□□ 2.34
TUBA4A-201ENST00000248437 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
TUBA4A-201ENST00000248437 PRDM2Q13029 1718 aa29.64■■■□□ 2.33
TUBA4A-201ENST00000248437 BIVM-ERCC5R4GMW8 1640 aa29.63■■■□□ 2.33
TUBA4A-201ENST00000248437 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
TUBA4A-201ENST00000248437 EHMT2Q96KQ7 1210 aa29.6■■■□□ 2.33
TUBA4A-201ENST00000248437 RUSC2Q8N2Y8 1516 aa29.59■■■□□ 2.33
TUBA4A-201ENST00000248437 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
TUBA4A-201ENST00000248437 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
TUBA4A-201ENST00000248437 TRIM26Q12899 539 aaPredicted RBP29.48■■■□□ 2.31
TUBA4A-201ENST00000248437 TNIKQ9UKE5 1360 aa29.45■■■□□ 2.31
TUBA4A-201ENST00000248437 FANCD2Q9BXW9 1451 aa29.45■■■□□ 2.3
TUBA4A-201ENST00000248437 KIF21BO75037 1637 aa29.44■■■□□ 2.3
TUBA4A-201ENST00000248437 GOLGA3Q08378 1498 aa29.44■■■□□ 2.3
TUBA4A-201ENST00000248437 CUX1P39880 1505 aa29.4■■■□□ 2.3
TUBA4A-201ENST00000248437 CEP164Q9UPV0 1460 aa29.38■■■□□ 2.29
TUBA4A-201ENST00000248437 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
TUBA4A-201ENST00000248437 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
TUBA4A-201ENST00000248437 HRCP23327 699 aa29.27■■■□□ 2.28
TUBA4A-201ENST00000248437 KIF21AQ7Z4S6 1674 aa29.23■■■□□ 2.27
TUBA4A-201ENST00000248437 UBTFP17480 764 aaKnown RBP29.23■■■□□ 2.27
TUBA4A-201ENST00000248437 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
TUBA4A-201ENST00000248437 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
TUBA4A-201ENST00000248437 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
TUBA4A-201ENST00000248437 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
TUBA4A-201ENST00000248437 DNMBPQ6XZF7 1577 aa29.11■■■□□ 2.25
TUBA4A-201ENST00000248437 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
TUBA4A-201ENST00000248437 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
TUBA4A-201ENST00000248437 PRXQ9BXM0 1461 aa29.08■■■□□ 2.25
TUBA4A-201ENST00000248437 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
TUBA4A-201ENST00000248437 CLIP1P30622 1438 aa28.97■■■□□ 2.23
TUBA4A-201ENST00000248437 ERCC6Q03468 1493 aa28.94■■■□□ 2.22
TUBA4A-201ENST00000248437 MRC2Q9UBG0 1479 aa28.93■■■□□ 2.22
TUBA4A-201ENST00000248437 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
TUBA4A-201ENST00000248437 CUX2O14529 1486 aa28.89■■■□□ 2.22
TUBA4A-201ENST00000248437 PPARGC1BQ86YN6 1023 aaKnown RBP28.85■■■□□ 2.21
TUBA4A-201ENST00000248437 VPS8Q8N3P4 1428 aa28.82■■■□□ 2.2
TUBA4A-201ENST00000248437 WDR62O43379 1518 aa28.79■■■□□ 2.2
TUBA4A-201ENST00000248437 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
TUBA4A-201ENST00000248437 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
TUBA4A-201ENST00000248437 IGF1RP08069 1367 aa28.77■■■□□ 2.2
TUBA4A-201ENST00000248437 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
TUBA4A-201ENST00000248437 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
TUBA4A-201ENST00000248437 TDRD9Q8NDG6 1382 aaKnown RBP28.66■■■□□ 2.18
TUBA4A-201ENST00000248437 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
TUBA4A-201ENST00000248437 ARAP1Q96P48 1450 aa28.63■■■□□ 2.17
TUBA4A-201ENST00000248437 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
TUBA4A-201ENST00000248437 CUL7Q14999 1698 aa28.58■■■□□ 2.17
TUBA4A-201ENST00000248437 ABCA5Q8WWZ7 1642 aa28.57■■■□□ 2.16
TUBA4A-201ENST00000248437 RANGAP1P46060 587 aaPredicted RBP28.55■■■□□ 2.16
TUBA4A-201ENST00000248437 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
TUBA4A-201ENST00000248437 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
TUBA4A-201ENST00000248437 ARHGAP35Q9NRY4 1499 aa28.51■■■□□ 2.16
TUBA4A-201ENST00000248437 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
TUBA4A-201ENST00000248437 APLP2Q06481 763 aa28.51■■■□□ 2.15
TUBA4A-201ENST00000248437 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
TUBA4A-201ENST00000248437 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms