Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.51■□□□□ 0.55
NIPAL1Q6NVV3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 AP002982.1-201ENST00000492365 877 ntBASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.5■□□□□ 0.55
NIPAL1Q6NVV3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 HTR7P1-201ENST00000538670 1336 ntBASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 AC005332.8-201ENST00000622750 2735 ntBASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 AC112907.3-201ENST00000577781 2400 ntBASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.49■□□□□ 0.55
NIPAL1Q6NVV3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms