Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 ECEL1P2-202ENST00000465689 757 ntBASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AL049597.2-201ENST00000565575 961 ntBASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 DGCR10-201ENST00000609839 495 ntBASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AC130371.2-201ENST00000619443 611 ntBASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
SNAP47Q5SQN1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 FAM207BP-201ENST00000447172 505 ntBASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 AC008040.2-201ENST00000461049 708 ntBASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
SNAP47Q5SQN1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 LIN28AP1-201ENST00000429574 405 ntBASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 AP005242.2-201ENST00000580065 1175 ntBASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 AC026471.1-201ENST00000564629 3026 ntBASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAP47Q5SQN1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 TERF1P1-201ENST00000311003 1181 ntBASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 AL445228.2-201ENST00000605589 952 ntBASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 AP000692.2-201ENST00000608391 879 ntBASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAP47Q5SQN1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms