RNA–Protein interactions for RNA: ENST00000410084.7

CAB39-203, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 1,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-203ENST00000410084 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
CAB39-203ENST00000410084 ABCC9O60706 1549 aa42.3■■■■■ 4.36
CAB39-203ENST00000410084 CCDC180Q9P1Z9 1646 aa42.12■■■■■ 4.33
CAB39-203ENST00000410084 RB1CC1Q8TDY2 1594 aa40.23■■■■■ 4.03
CAB39-203ENST00000410084 NACADO15069 1562 aa39.93■■■■□ 3.98
CAB39-203ENST00000410084 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
CAB39-203ENST00000410084 DNAJC5BQ9UF47 199 aa39.78■■■■□ 3.96
CAB39-203ENST00000410084 PABPN1Q86U42 306 aaKnown RBP eCLIP39.44■■■■□ 3.9
CAB39-203ENST00000410084 MYO15BQ96JP2 1530 aa39.34■■■■□ 3.89
CAB39-203ENST00000410084 UNC13AQ9UPW8 1703 aa39.15■■■■□ 3.86
CAB39-203ENST00000410084 BICRAQ9NZM4 1560 aa38.96■■■■□ 3.83
CAB39-203ENST00000410084 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
CAB39-203ENST00000410084 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
CAB39-203ENST00000410084 SHROOM4Q9ULL8 1493 aa38.53■■■■□ 3.76
CAB39-203ENST00000410084 SCRIBQ14160 1630 aa38.39■■■■□ 3.74
CAB39-203ENST00000410084 CC2D2AQ9P2K1 1620 aa38.17■■■■□ 3.7
CAB39-203ENST00000410084 CECR2Q9BXF3 1484 aa38.15■■■■□ 3.7
CAB39-203ENST00000410084 EIF4G1Q04637 1599 aaKnown RBP38.07■■■■□ 3.68
CAB39-203ENST00000410084 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
CAB39-203ENST00000410084 ATAD2BQ9ULI0 1458 aa36.73■■■■□ 3.47
CAB39-203ENST00000410084 DNAJC5Q9H3Z4 198 aa36.69■■■■□ 3.46
CAB39-203ENST00000410084 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
CAB39-203ENST00000410084 SMARCA4P51532 1647 aa36.61■■■■□ 3.45
CAB39-203ENST00000410084 ERCC6Q03468 1493 aa36.61■■■■□ 3.45
CAB39-203ENST00000410084 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
CAB39-203ENST00000410084 CUX2O14529 1486 aa36.53■■■■□ 3.44
CAB39-203ENST00000410084 BAZ1AQ9NRL2 1556 aaPredicted RBP36.47■■■■□ 3.43
CAB39-203ENST00000410084 BAZ1BQ9UIG0 1483 aaKnown RBP36.39■■■■□ 3.42
CAB39-203ENST00000410084 NESP48681 1621 aa36.27■■■■□ 3.4
CAB39-203ENST00000410084 PEG3Q9GZU2 1588 aa36.26■■■■□ 3.4
CAB39-203ENST00000410084 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
CAB39-203ENST00000410084 LAMC3Q9Y6N6 1575 aa36.04■■■■□ 3.36
CAB39-203ENST00000410084 PDS5BQ9NTI5 1447 aa35.93■■■■□ 3.34
CAB39-203ENST00000410084 THOC2Q8NI27 1593 aaKnown RBP35.86■■■■□ 3.33
CAB39-203ENST00000410084 CADPSQ9ULU8 1353 aa35.79■■■■□ 3.32
CAB39-203ENST00000410084 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
CAB39-203ENST00000410084 WIZO95785 1651 aa35.69■■■■□ 3.3
CAB39-203ENST00000410084 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
CAB39-203ENST00000410084 WDR62O43379 1518 aa35.41■■■■□ 3.26
CAB39-203ENST00000410084 RSF1Q96T23 1441 aaPredicted RBP35.41■■■■□ 3.26
CAB39-203ENST00000410084 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
CAB39-203ENST00000410084 FANCD2Q9BXW9 1451 aa35.35■■■■□ 3.25
CAB39-203ENST00000410084 CFTRP13569 1480 aa35.32■■■■□ 3.24
CAB39-203ENST00000410084 TOP2AP11388 1531 aaKnown RBP35.26■■■■□ 3.24
CAB39-203ENST00000410084 TRIM41Q8WV44 630 aa35.06■■■■□ 3.2
CAB39-203ENST00000410084 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
CAB39-203ENST00000410084 OSCARQ8IYS5 282 aa34.97■■■■□ 3.19
CAB39-203ENST00000410084 CCDC88BA6NC98 1476 aa34.91■■■■□ 3.18
CAB39-203ENST00000410084 PRDM2Q13029 1718 aa34.82■■■■□ 3.17
CAB39-203ENST00000410084 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
CAB39-203ENST00000410084 TOPBP1Q92547 1522 aa34.64■■■■□ 3.14
CAB39-203ENST00000410084 ABCC8Q09428 1581 aa34.64■■■■□ 3.14
CAB39-203ENST00000410084 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
CAB39-203ENST00000410084 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
CAB39-203ENST00000410084 EIF4G3O43432 1585 aaKnown RBP34.37■■■■□ 3.09
CAB39-203ENST00000410084 RIMBP3CA6NJZ7 1639 aa34.33■■■■□ 3.09
CAB39-203ENST00000410084 RIMBP3BA6NNM3 1639 aa34.33■■■■□ 3.09
CAB39-203ENST00000410084 RIMBP3Q9UFD9 1639 aa34.33■■■■□ 3.09
CAB39-203ENST00000410084 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.093e-6■■■□□ 19
CAB39-203ENST00000410084 TARBP1Q13395 1621 aaKnown RBP34.28■■■■□ 3.08
CAB39-203ENST00000410084 POLA1P09884 1462 aaPredicted RBP34.28■■■■□ 3.08
CAB39-203ENST00000410084 ARHGEF11O15085 1522 aa34.25■■■■□ 3.07
CAB39-203ENST00000410084 FBLN2P98095 1184 aa34.25■■■■□ 3.07
CAB39-203ENST00000410084 SOGA1O94964 1423 aa34.2■■■■□ 3.07
CAB39-203ENST00000410084 RAD54L2Q9Y4B4 1467 aa34.16■■■■□ 3.06
CAB39-203ENST00000410084 CYB5RLQ6IPT4 315 aa34.14■■■■□ 3.06
CAB39-203ENST00000410084 TDRD9Q8NDG6 1382 aaKnown RBP34.13■■■■□ 3.05
CAB39-203ENST00000410084 CHD1O14646 1710 aa34.1■■■■□ 3.05
CAB39-203ENST00000410084 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
CAB39-203ENST00000410084 CHMP7Q8WUX9 453 aaPredicted RBP33.99■■■■□ 3.03
CAB39-203ENST00000410084 WDR97A6NE52 1622 aa33.98■■■■□ 3.03
CAB39-203ENST00000410084 CUX1P39880 1505 aa33.97■■■■□ 3.03
CAB39-203ENST00000410084 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
CAB39-203ENST00000410084 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
CAB39-203ENST00000410084 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
CAB39-203ENST00000410084 ARAP1Q96P48 1450 aa33.89■■■■□ 3.02
CAB39-203ENST00000410084 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
CAB39-203ENST00000410084 TRHP20396 242 aaPredicted RBP33.83■■■■□ 3.01
CAB39-203ENST00000410084 SYNJ1O43426 1573 aa33.79■■■■□ 3
CAB39-203ENST00000410084 SYNJ2O15056 1496 aa33.78■■■■□ 3
CAB39-203ENST00000410084 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
CAB39-203ENST00000410084 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
CAB39-203ENST00000410084 ABCA10Q8WWZ4 1543 aa33.68■■■□□ 2.98
CAB39-203ENST00000410084 PBRM1Q86U86 1689 aa33.61■■■□□ 2.97
CAB39-203ENST00000410084 WRNQ14191 1432 aaPredicted RBP eCLIP33.6■■■□□ 2.97
CAB39-203ENST00000410084 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
CAB39-203ENST00000410084 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
CAB39-203ENST00000410084 TOP2BQ02880 1626 aa33.41■■■□□ 2.94
CAB39-203ENST00000410084 BIVM-ERCC5R4GMW8 1640 aa33.37■■■□□ 2.93
CAB39-203ENST00000410084 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
CAB39-203ENST00000410084 ADAMTS12P58397 1594 aa33.32■■■□□ 2.92
CAB39-203ENST00000410084 NUP160Q12769 1436 aa33.3■■■□□ 2.92
CAB39-203ENST00000410084 ERICH3Q5RHP9 1530 aa33.25■■■□□ 2.91
CAB39-203ENST00000410084 CEP170Q5SW79 1584 aa33.25■■■□□ 2.91
CAB39-203ENST00000410084 ERCC6L2Q5T890 1561 aa33.18■■■□□ 2.9
CAB39-203ENST00000410084 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
CAB39-203ENST00000410084 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
CAB39-203ENST00000410084 PRG4Q92954 1404 aaPredicted RBP33.05■■■□□ 2.88
CAB39-203ENST00000410084 AEBP2Q6ZN18 517 aaPredicted RBP32.97■■■□□ 2.87
CAB39-203ENST00000410084 NPM1P06748 294 aaKnown RBP eCLIP32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 445.3 ms