RNA–Protein interactions for RNA: ENST00000608868.2

SMIM8-209, Transcript of small integral membrane protein 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM8, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-209ENST00000608868 NISCHQ9Y2I1 1504 aa47.71■■■■■ 5.23
SMIM8-209ENST00000608868 ABCC9O60706 1549 aa43.93■■■■■ 4.62
SMIM8-209ENST00000608868 CCDC180Q9P1Z9 1646 aa43.04■■■■■ 4.48
SMIM8-209ENST00000608868 DNAJC5BQ9UF47 199 aa41.96■■■■■ 4.31
SMIM8-209ENST00000608868 RB1CC1Q8TDY2 1594 aa41.4■■■■■ 4.22
SMIM8-209ENST00000608868 NACADO15069 1562 aa40.94■■■■■ 4.14
SMIM8-209ENST00000608868 PABPN1Q86U42 306 aaKnown RBP eCLIP40.86■■■■■ 4.13
SMIM8-209ENST00000608868 DCAF8L2P0C7V8 631 aa40.79■■■■■ 4.12
SMIM8-209ENST00000608868 UNC13AQ9UPW8 1703 aa40.4■■■■■ 4.06
SMIM8-209ENST00000608868 BICRAQ9NZM4 1560 aa40.23■■■■■ 4.03
SMIM8-209ENST00000608868 MYO15BQ96JP2 1530 aa40.1■■■■■ 4.01
SMIM8-209ENST00000608868 CECR2Q9BXF3 1484 aa39.63■■■■□ 3.94
SMIM8-209ENST00000608868 CC2D2AQ9P2K1 1620 aa39.58■■■■□ 3.93
SMIM8-209ENST00000608868 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
SMIM8-209ENST00000608868 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
SMIM8-209ENST00000608868 DCAF1Q9Y4B6 1507 aa39.32■■■■□ 3.89
SMIM8-209ENST00000608868 EIF4G1Q04637 1599 aaKnown RBP39.31■■■■□ 3.88
SMIM8-209ENST00000608868 SCRIBQ14160 1630 aa39.25■■■■□ 3.87
SMIM8-209ENST00000608868 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
SMIM8-209ENST00000608868 CUX2O14529 1486 aa38.1■■■■□ 3.69
SMIM8-209ENST00000608868 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
SMIM8-209ENST00000608868 NCAPD3P42695 1498 aa37.85■■■■□ 3.65
SMIM8-209ENST00000608868 ATAD2BQ9ULI0 1458 aa37.63■■■■□ 3.61
SMIM8-209ENST00000608868 NESP48681 1621 aa37.51■■■■□ 3.6
SMIM8-209ENST00000608868 SMARCA2P51531 1590 aa37.43■■■■□ 3.58
SMIM8-209ENST00000608868 HMGXB3Q12766 1538 aa37.42■■■■□ 3.58
SMIM8-209ENST00000608868 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
SMIM8-209ENST00000608868 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
SMIM8-209ENST00000608868 THOC2Q8NI27 1593 aaKnown RBP37.19■■■■□ 3.54
SMIM8-209ENST00000608868 TRIM41Q8WV44 630 aa37.07■■■■□ 3.52
SMIM8-209ENST00000608868 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
SMIM8-209ENST00000608868 LAMC3Q9Y6N6 1575 aa37.06■■■■□ 3.52
SMIM8-209ENST00000608868 PEG3Q9GZU2 1588 aa36.97■■■■□ 3.51
SMIM8-209ENST00000608868 PDS5BQ9NTI5 1447 aa36.94■■■■□ 3.5
SMIM8-209ENST00000608868 KIF21AQ7Z4S6 1674 aa36.92■■■■□ 3.5
SMIM8-209ENST00000608868 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
SMIM8-209ENST00000608868 CADPSQ9ULU8 1353 aa36.69■■■■□ 3.46
SMIM8-209ENST00000608868 MRC2Q9UBG0 1479 aa36.63■■■■□ 3.45
SMIM8-209ENST00000608868 WDR62O43379 1518 aa36.54■■■■□ 3.44
SMIM8-209ENST00000608868 OSCARQ8IYS5 282 aa36.36■■■■□ 3.41
SMIM8-209ENST00000608868 CEP164Q9UPV0 1460 aa36.34■■■■□ 3.41
SMIM8-209ENST00000608868 WIZO95785 1651 aa36.27■■■■□ 3.4
SMIM8-209ENST00000608868 FANCD2Q9BXW9 1451 aa36.25■■■■□ 3.39
SMIM8-209ENST00000608868 CFTRP13569 1480 aa36.08■■■■□ 3.37
SMIM8-209ENST00000608868 URB2Q14146 1524 aaKnown RBP35.99■■■■□ 3.35
SMIM8-209ENST00000608868 RIMBP3CA6NJZ7 1639 aa35.85■■■■□ 3.33
SMIM8-209ENST00000608868 RIMBP3BA6NNM3 1639 aa35.85■■■■□ 3.33
SMIM8-209ENST00000608868 RIMBP3Q9UFD9 1639 aa35.85■■■■□ 3.33
SMIM8-209ENST00000608868 RSF1Q96T23 1441 aaPredicted RBP35.77■■■■□ 3.32
SMIM8-209ENST00000608868 TOP2AP11388 1531 aaKnown RBP35.74■■■■□ 3.31
SMIM8-209ENST00000608868 ZNF608Q9ULD9 1512 aaPredicted RBP35.69■■■■□ 3.3
SMIM8-209ENST00000608868 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
SMIM8-209ENST00000608868 IFT140Q96RY7 1462 aa35.65■■■■□ 3.3
SMIM8-209ENST00000608868 CYB5RLQ6IPT4 315 aa35.58■■■■□ 3.29
SMIM8-209ENST00000608868 PRDM2Q13029 1718 aa35.51■■■■□ 3.27
SMIM8-209ENST00000608868 TOPBP1Q92547 1522 aa35.47■■■■□ 3.27
SMIM8-209ENST00000608868 TRHP20396 242 aaPredicted RBP35.44■■■■□ 3.26
SMIM8-209ENST00000608868 CCDC88BA6NC98 1476 aa35.42■■■■□ 3.26
SMIM8-209ENST00000608868 EIF4G3O43432 1585 aaKnown RBP35.38■■■■□ 3.25
SMIM8-209ENST00000608868 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
SMIM8-209ENST00000608868 AQRO60306 1485 aaKnown RBP eCLIP35.31■■■■□ 3.24
SMIM8-209ENST00000608868 FBLN2P98095 1184 aa35.29■■■■□ 3.24
SMIM8-209ENST00000608868 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
SMIM8-209ENST00000608868 CHD1O14646 1710 aa35.24■■■■□ 3.23
SMIM8-209ENST00000608868 DNMBPQ6XZF7 1577 aa35.24■■■■□ 3.23
SMIM8-209ENST00000608868 TARBP1Q13395 1621 aaKnown RBP35.17■■■■□ 3.22
SMIM8-209ENST00000608868 POLA1P09884 1462 aaPredicted RBP35.05■■■■□ 3.2
SMIM8-209ENST00000608868 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
SMIM8-209ENST00000608868 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
SMIM8-209ENST00000608868 AEBP2Q6ZN18 517 aaPredicted RBP34.96■■■■□ 3.19
SMIM8-209ENST00000608868 SOGA1O94964 1423 aa34.94■■■■□ 3.18
SMIM8-209ENST00000608868 CHMP7Q8WUX9 453 aaPredicted RBP34.88■■■■□ 3.17
SMIM8-209ENST00000608868 SNAPC4Q5SXM2 1469 aa34.88■■■■□ 3.17
SMIM8-209ENST00000608868 CLASP1Q7Z460 1538 aa34.86■■■■□ 3.17
SMIM8-209ENST00000608868 SYNJ1O43426 1573 aa34.77■■■■□ 3.16
SMIM8-209ENST00000608868 FGD5Q6ZNL6 1462 aa34.74■■■■□ 3.15
SMIM8-209ENST00000608868 MAGI1Q96QZ7 1491 aaPredicted RBP34.72■■■■□ 3.15
SMIM8-209ENST00000608868 WDR97A6NE52 1622 aa34.71■■■■□ 3.15
SMIM8-209ENST00000608868 GRIN2BQ13224 1484 aa34.68■■■■□ 3.14
SMIM8-209ENST00000608868 SYNJ2O15056 1496 aa34.64■■■■□ 3.14
SMIM8-209ENST00000608868 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
SMIM8-209ENST00000608868 CUX1P39880 1505 aa34.59■■■■□ 3.13
SMIM8-209ENST00000608868 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
SMIM8-209ENST00000608868 ERCC6L2Q5T890 1561 aa34.3■■■■□ 3.08
SMIM8-209ENST00000608868 ABCA10Q8WWZ4 1543 aa34.29■■■■□ 3.08
SMIM8-209ENST00000608868 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
SMIM8-209ENST00000608868 GRIN2AQ12879 1464 aa34.22■■■■□ 3.07
SMIM8-209ENST00000608868 CEP170Q5SW79 1584 aa34.16■■■■□ 3.06
SMIM8-209ENST00000608868 NUP160Q12769 1436 aa34.13■■■■□ 3.05
SMIM8-209ENST00000608868 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
SMIM8-209ENST00000608868 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
SMIM8-209ENST00000608868 SHROOM2Q13796 1616 aa34.01■■■■□ 3.04
SMIM8-209ENST00000608868 FHAD1B1AJZ9 1412 aa34■■■■□ 3.03
SMIM8-209ENST00000608868 KIF13AQ9H1H9 1805 aa33.97■■■■□ 3.03
SMIM8-209ENST00000608868 PRG4Q92954 1404 aaPredicted RBP33.92■■■■□ 3.02
SMIM8-209ENST00000608868 FAM69CQ0P6D2 419 aa33.88■■■■□ 3.01
SMIM8-209ENST00000608868 JPH4Q96JJ6 628 aa33.88■■■■□ 3.01
SMIM8-209ENST00000608868 ERICH3Q5RHP9 1530 aa33.83■■■■□ 3.01
SMIM8-209ENST00000608868 NPM1P06748 294 aaKnown RBP eCLIP33.8■■■■□ 3
SMIM8-209ENST00000608868 TOP2BQ02880 1626 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms