Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH20Q9HBT6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 AP001412.1-201ENST00000608405 714 ntBASIC16.84■□□□□ 0.29
CDH20Q9HBT6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.84■□□□□ 0.29
CDH20Q9HBT6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH20Q9HBT6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH20Q9HBT6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH20Q9HBT6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH20Q9HBT6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CDH20Q9HBT6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 AC125437.2-201ENST00000625180 2167 ntBASIC16.83■□□□□ 0.28
CDH20Q9HBT6 TREX1-205ENST00000625293 1783 ntBASIC16.83■□□□□ 0.28
CDH20Q9HBT6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH20Q9HBT6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC120498.9-201ENST00000339021 3867 ntBASIC16.82■□□□□ 0.28
CDH20Q9HBT6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC008550.1-201ENST00000511500 884 ntBASIC16.82■□□□□ 0.28
CDH20Q9HBT6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC073195.1-201ENST00000607241 877 ntBASIC16.82■□□□□ 0.28
CDH20Q9HBT6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH20Q9HBT6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 288.7 ms