Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.16■□□□□ 0.98
COL1A2P08123 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.16■□□□□ 0.98
COL1A2P08123 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.16■□□□□ 0.98
COL1A2P08123 YBX1P2-201ENST00000489612 999 ntBASIC21.16■□□□□ 0.98
COL1A2P08123 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.16■□□□□ 0.98
COL1A2P08123 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.16■□□□□ 0.98
COL1A2P08123 LINC01238-205ENST00000567549 1107 ntBASIC21.16■□□□□ 0.98
COL1A2P08123 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
COL1A2P08123 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.16■□□□□ 0.98
COL1A2P08123 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.16■□□□□ 0.98
COL1A2P08123 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL1A2P08123 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.15■□□□□ 0.98
COL1A2P08123 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COL1A2P08123 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL1A2P08123 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 RNF152P1-201ENST00000397754 604 ntBASIC21.15■□□□□ 0.98
COL1A2P08123 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL1A2P08123 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL1A2P08123 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.15■□□□□ 0.98
COL1A2P08123 AC139887.4-201ENST00000607877 719 ntBASIC21.15■□□□□ 0.98
COL1A2P08123 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
COL1A2P08123 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.15■□□□□ 0.98
COL1A2P08123 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
COL1A2P08123 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL1A2P08123 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A2P08123 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A2P08123 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A2P08123 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A2P08123 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL1A2P08123 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.14■□□□□ 0.98
COL1A2P08123 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.14■□□□□ 0.98
COL1A2P08123 FAM8A6P-201ENST00000407496 1135 ntBASIC21.14■□□□□ 0.98
COL1A2P08123 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
COL1A2P08123 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.14■□□□□ 0.98
COL1A2P08123 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.14■□□□□ 0.98
COL1A2P08123 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A2P08123 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A2P08123 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
COL1A2P08123 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.14■□□□□ 0.97
COL1A2P08123 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.14■□□□□ 0.97
COL1A2P08123 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A2P08123 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A2P08123 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL1A2P08123 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 TREX1-205ENST00000625293 1783 ntBASIC21.13■□□□□ 0.97
COL1A2P08123 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.13■□□□□ 0.97
COL1A2P08123 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A2P08123 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A2P08123 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.13■□□□□ 0.97
COL1A2P08123 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.13■□□□□ 0.97
COL1A2P08123 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL1A2P08123 AL031432.5-201ENST00000641059 760 ntBASIC21.13■□□□□ 0.97
COL1A2P08123 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL1A2P08123 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
COL1A2P08123 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL1A2P08123 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A2P08123 KRT8P45-201ENST00000414328 1447 ntBASIC21.12■□□□□ 0.97
COL1A2P08123 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A2P08123 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.12■□□□□ 0.97
COL1A2P08123 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.12■□□□□ 0.97
COL1A2P08123 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A2P08123 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms