Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRGV1A0A0A0MS02 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 PRKY-204ENST00000533551 1019 ntBASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV1A0A0A0MS02 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 UNC93B5-201ENST00000530315 699 ntBASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 AL121829.2-201ENST00000620908 328 ntBASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV1A0A0A0MS02 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV1A0A0A0MS02 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms