Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM56-RWDD3S4R434 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 IRX1P1-201ENST00000438849 1838 ntBASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 AL589743.5-201ENST00000616611 1050 ntBASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM56-RWDD3S4R434 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMEM56-RWDD3S4R434 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 NOC2LP1-202ENST00000452600 2235 ntBASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 AC005332.8-201ENST00000622750 2735 ntBASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM56-RWDD3S4R434 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM56-RWDD3S4R434 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms