Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAP47Q5SQN1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 AC011506.1-201ENST00000474329 610 ntBASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 AC145285.6-201ENST00000604632 637 ntBASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 TMEM179-206ENST00000616017 1645 ntBASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 AL512408.1-201ENST00000569378 2000 ntBASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAP47Q5SQN1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 CRYGFP-201ENST00000418459 633 ntBASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 AC004980.1-204ENST00000429707 299 ntBASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 B3GAT3P1-201ENST00000471720 806 ntBASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAP47Q5SQN1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNAP47Q5SQN1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 MESTP1-201ENST00000404287 994 ntBASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 AC010947.1-201ENST00000623454 693 ntBASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.76■□□□□ 0.59
SNAP47Q5SQN1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAP47Q5SQN1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.75■□□□□ 0.59
SNAP47Q5SQN1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.75■□□□□ 0.59
SNAP47Q5SQN1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAP47Q5SQN1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAP47Q5SQN1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAP47Q5SQN1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms