Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AP006587.1-201ENST00000534129 1502 ntBASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 AC093484.2-201ENST00000580996 2166 ntBASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV1A0A0A0MS02 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV1A0A0A0MS02 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 UNC93B4-201ENST00000505679 747 ntBASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.03□□□□□ -0.16
TRGV1A0A0A0MS02 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms