Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEM56-RWDD3S4R434 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 CYP2T3P-201ENST00000601990 817 ntBASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 BICD1-207ENST00000551848 1962 ntBASIC15.86■□□□□ 0.13
TMEM56-RWDD3S4R434 HCG11-201ENST00000411553 5696 ntBASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 C2orf69P4-201ENST00000565394 541 ntBASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM56-RWDD3S4R434 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms