Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.17■□□□□ 0.18
CCSO14618 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.17■□□□□ 0.18
CCSO14618 BCL2-203ENST00000589955 5011 ntBASIC16.17■□□□□ 0.18
CCSO14618 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCSO14618 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCSO14618 FP475955.4-201ENST00000623131 1990 ntBASIC16.17■□□□□ 0.18
CCSO14618 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCSO14618 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCSO14618 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.16■□□□□ 0.18
CCSO14618 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.16■□□□□ 0.18
CCSO14618 TEX21P-204ENST00000641479 1693 ntBASIC16.16■□□□□ 0.18
CCSO14618 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.16■□□□□ 0.18
CCSO14618 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.16■□□□□ 0.18
CCSO14618 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.16■□□□□ 0.18
CCSO14618 AC008764.7-201ENST00000593779 1081 ntBASIC16.16■□□□□ 0.18
CCSO14618 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.16■□□□□ 0.18
CCSO14618 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.16■□□□□ 0.18
CCSO14618 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCSO14618 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.16■□□□□ 0.18
CCSO14618 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCSO14618 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.16■□□□□ 0.18
CCSO14618 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.16■□□□□ 0.18
CCSO14618 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCSO14618 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCSO14618 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCSO14618 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCSO14618 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 AC079140.4-201ENST00000507448 529 ntBASIC16.15■□□□□ 0.18
CCSO14618 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCSO14618 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCSO14618 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCSO14618 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCSO14618 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.15■□□□□ 0.18
CCSO14618 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCSO14618 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.14■□□□□ 0.17
CCSO14618 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.14■□□□□ 0.17
CCSO14618 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.14■□□□□ 0.17
CCSO14618 GUSBP5-201ENST00000418136 578 ntBASIC16.14■□□□□ 0.17
CCSO14618 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.14■□□□□ 0.17
CCSO14618 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.14■□□□□ 0.17
CCSO14618 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.14■□□□□ 0.17
CCSO14618 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.14■□□□□ 0.17
CCSO14618 PTBP1P-201ENST00000554374 1601 ntBASIC16.14■□□□□ 0.17
CCSO14618 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.14■□□□□ 0.17
CCSO14618 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCSO14618 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCSO14618 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms