Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 TMEM191A-211ENST00000637163 1067 ntBASIC17.05■□□□□ 0.32
CDH20Q9HBT6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH20Q9HBT6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 PRORSD1P-201ENST00000295112 541 ntBASIC17.04■□□□□ 0.32
CDH20Q9HBT6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 YBX1P10-201ENST00000444752 975 ntBASIC17.04■□□□□ 0.32
CDH20Q9HBT6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 AC004264.1-201ENST00000608354 794 ntBASIC17.04■□□□□ 0.32
CDH20Q9HBT6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.04■□□□□ 0.32
CDH20Q9HBT6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH20Q9HBT6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 AC142381.4-202ENST00000563973 229 ntBASIC17.03■□□□□ 0.32
CDH20Q9HBT6 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.03■□□□□ 0.32
CDH20Q9HBT6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH20Q9HBT6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 RPPH1-201ENST00000516869 333 ntBASIC17.02■□□□□ 0.32
CDH20Q9HBT6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH20Q9HBT6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms