Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SFTPBP07988 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.91■□□□□ 0.3
SFTPBP07988 AC073210.2-201ENST00000430369 194 ntBASIC16.91■□□□□ 0.3
SFTPBP07988 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.91■□□□□ 0.3
SFTPBP07988 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.91■□□□□ 0.3
SFTPBP07988 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.91■□□□□ 0.3
SFTPBP07988 KRT18P6-201ENST00000555540 1265 ntBASIC16.91■□□□□ 0.3
SFTPBP07988 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SFTPBP07988 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 TREX1-205ENST00000625293 1783 ntBASIC16.91■□□□□ 0.3
SFTPBP07988 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SFTPBP07988 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.91■□□□□ 0.3
SFTPBP07988 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SFTPBP07988 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SFTPBP07988 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SFTPBP07988 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
SFTPBP07988 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SFTPBP07988 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.9■□□□□ 0.3
SFTPBP07988 KRT8P20-201ENST00000423953 1409 ntBASIC16.9■□□□□ 0.3
SFTPBP07988 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.9■□□□□ 0.3
SFTPBP07988 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SFTPBP07988 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.9■□□□□ 0.3
SFTPBP07988 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SFTPBP07988 AP000974.1-201ENST00000623909 2387 ntBASIC16.9■□□□□ 0.3
SFTPBP07988 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.9■□□□□ 0.3
SFTPBP07988 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SFTPBP07988 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SFTPBP07988 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SFTPBP07988 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.89■□□□□ 0.3
SFTPBP07988 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SFTPBP07988 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SFTPBP07988 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.89■□□□□ 0.29
SFTPBP07988 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.89■□□□□ 0.29
SFTPBP07988 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 LSM12P1-201ENST00000411836 588 ntBASIC16.89■□□□□ 0.29
SFTPBP07988 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.89■□□□□ 0.29
SFTPBP07988 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.89■□□□□ 0.29
SFTPBP07988 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.89■□□□□ 0.29
SFTPBP07988 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.89■□□□□ 0.29
SFTPBP07988 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SFTPBP07988 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.89■□□□□ 0.29
SFTPBP07988 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SFTPBP07988 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.89■□□□□ 0.29
SFTPBP07988 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SFTPBP07988 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 KRT16P6-202ENST00000425692 1426 ntBASIC16.88■□□□□ 0.29
SFTPBP07988 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.88■□□□□ 0.29
SFTPBP07988 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 BCL2-203ENST00000589955 5011 ntBASIC16.88■□□□□ 0.29
SFTPBP07988 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SFTPBP07988 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 KRT17P1-201ENST00000399211 1546 ntBASIC16.88■□□□□ 0.29
SFTPBP07988 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.88■□□□□ 0.29
SFTPBP07988 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 DUSP5P2-201ENST00000426873 1033 ntBASIC16.88■□□□□ 0.29
SFTPBP07988 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SFTPBP07988 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.88■□□□□ 0.29
SFTPBP07988 AL589743.5-201ENST00000616611 1050 ntBASIC16.88■□□□□ 0.29
SFTPBP07988 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SFTPBP07988 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 AC009237.14-201ENST00000609975 1594 ntBASIC16.88■□□□□ 0.29
SFTPBP07988 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms