Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NOTCH3Q9UM47 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NOTCH3Q9UM47 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NOTCH3Q9UM47 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.69■□□□□ 0.74
NOTCH3Q9UM47 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NOTCH3Q9UM47 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NOTCH3Q9UM47 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NOTCH3Q9UM47 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH3Q9UM47 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NOTCH3Q9UM47 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NOTCH3Q9UM47 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH3Q9UM47 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH3Q9UM47 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NOTCH3Q9UM47 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NOTCH3Q9UM47 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NOTCH3Q9UM47 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NOTCH3Q9UM47 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.64■□□□□ 0.74
NOTCH3Q9UM47 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NOTCH3Q9UM47 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH3Q9UM47 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.64■□□□□ 0.73
NOTCH3Q9UM47 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NOTCH3Q9UM47 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH3Q9UM47 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NOTCH3Q9UM47 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH3Q9UM47 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH3Q9UM47 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NOTCH3Q9UM47 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
NOTCH3Q9UM47 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 AC012354.3-201ENST00000623734 483 ntBASIC19.62■□□□□ 0.73
NOTCH3Q9UM47 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NOTCH3Q9UM47 AC010864.1-201ENST00000609407 1511 ntBASIC19.61■□□□□ 0.73
NOTCH3Q9UM47 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NOTCH3Q9UM47 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOTCH3Q9UM47 AC148477.6-201ENST00000623746 465 ntBASIC19.59■□□□□ 0.73
NOTCH3Q9UM47 AC022413.1-201ENST00000624602 984 ntBASIC19.59■□□□□ 0.73
NOTCH3Q9UM47 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.59■□□□□ 0.73
NOTCH3Q9UM47 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOTCH3Q9UM47 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
NOTCH3Q9UM47 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOTCH3Q9UM47 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOTCH3Q9UM47 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOTCH3Q9UM47 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.58■□□□□ 0.72
NOTCH3Q9UM47 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.57■□□□□ 0.72
NOTCH3Q9UM47 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NOTCH3Q9UM47 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NOTCH3Q9UM47 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.56■□□□□ 0.72
NOTCH3Q9UM47 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOTCH3Q9UM47 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NOTCH3Q9UM47 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NOTCH3Q9UM47 AC135983.2-203ENST00000454486 1613 ntBASIC19.55■□□□□ 0.72
NOTCH3Q9UM47 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NOTCH3Q9UM47 WHAMMP2-203ENST00000563942 1603 ntBASIC19.54■□□□□ 0.72
NOTCH3Q9UM47 AC018358.1-201ENST00000631079 1402 ntBASIC19.54■□□□□ 0.72
NOTCH3Q9UM47 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NOTCH3Q9UM47 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NOTCH3Q9UM47 AC060814.1-201ENST00000554326 538 ntBASIC19.53■□□□□ 0.72
NOTCH3Q9UM47 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NOTCH3Q9UM47 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.53■□□□□ 0.72
NOTCH3Q9UM47 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NOTCH3Q9UM47 TSPY13P-201ENST00000338964 914 ntBASIC19.52■□□□□ 0.72
NOTCH3Q9UM47 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NOTCH3Q9UM47 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.52■□□□□ 0.72
NOTCH3Q9UM47 AC127502.1-201ENST00000399971 1502 ntBASIC19.52■□□□□ 0.72
NOTCH3Q9UM47 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NOTCH3Q9UM47 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 KRT18P60-201ENST00000312876 1297 ntBASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH3Q9UM47 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.5■□□□□ 0.71
NOTCH3Q9UM47 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH3Q9UM47 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH3Q9UM47 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH3Q9UM47 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 AL033527.3-201ENST00000566366 1196 ntBASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.48■□□□□ 0.71
NOTCH3Q9UM47 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NOTCH3Q9UM47 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.47■□□□□ 0.71
NOTCH3Q9UM47 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NOTCH3Q9UM47 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms